RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ARHGEF9O43307 516 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 FOXS1O43638 330 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 GLI4P10075 376 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 ACVR2AP27037 513 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 CYB561P49447 251 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 NR0B1P51843 470 aaKnown RBP14.88□□□□□ -0.03
RNF40-205ENST00000563909 SLC25A35Q3KQZ1 300 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 FLYWCH1Q4VC44 716 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 UBAP2Q5T6F2 1119 aaKnown RBP14.88□□□□□ -0.03
RNF40-205ENST00000563909 ANKRD37Q7Z713 158 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 RPS19BP1Q86WX3 136 aaKnown RBP14.88□□□□□ -0.03
RNF40-205ENST00000563909 ZNF227Q86WZ6 799 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 SULF2Q8IWU5 870 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 CSNK1A1LQ8N752 337 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 ARMC2Q8NEN0 867 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 OR2L3Q8NG85 312 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 OR5M9Q8NGP3 310 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 UBLCP1Q8WVY7 318 aaPredicted RBP14.88□□□□□ -0.03
RNF40-205ENST00000563909 RAD51AP1Q96B01 352 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 VPS39Q96JC1 886 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 GPR21Q99679 349 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 CCDC77Q9BR77 488 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 TTYH2Q9BSA4 534 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 MCMBPQ9BTE3 642 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 DRC3Q9H069 523 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 DEFB127Q9H1M4 99 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 PLSCR2Q9NRY7 297 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 PNPLA3Q9NST1 481 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 BEX4Q9NWD9 120 aaPredicted RBP14.88□□□□□ -0.03
RNF40-205ENST00000563909 Q9UFV3 132 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 TRMT6Q9UJA5 497 aaKnown RBP14.88□□□□□ -0.03
RNF40-205ENST00000563909 MED16Q9Y2X0 877 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 IKBKGQ9Y6K9 419 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 NPIPA2E9PIF3 369 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 NPIPA3F8WFD2 350 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 KLRC4-KLRK1H3BQV0 150 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 TPP2P29144 1249 aaPredicted RBP14.87□□□□□ -0.03
RNF40-205ENST00000563909 ATP5DP30049 168 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 PEX19P40855 299 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 SLC12A2P55011 1212 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 TAS2R50P59544 299 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 SLC29A2Q14542 456 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 EFTUD2Q15029 972 aaKnown RBP eCLIP14.87□□□□□ -0.032e-8■■□□□ 11.5
RNF40-205ENST00000563909 DAZAP2Q15038 168 aaPredicted RBP14.87□□□□□ -0.03
RNF40-205ENST00000563909 WDR53Q7Z5U6 358 aaPredicted RBP14.87□□□□□ -0.03
RNF40-205ENST00000563909 LGI4Q8N135 537 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 RAB42Q8N4Z0 105 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 OR52N2Q8NGI0 321 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 C16orf52Q8NHV5 167 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 UHMK1Q8TAS1 419 aaKnown RBP14.87□□□□□ -0.03
RNF40-205ENST00000563909 AENQ8WTP8 325 aaKnown RBP14.87□□□□□ -0.03
RNF40-205ENST00000563909 CAVIN3Q969G5 261 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 FAM136AQ96C01 138 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 SARGQ9BW04 601 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 PLEKHF2Q9H8W4 249 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 GALPQ9UBC7 116 aa14.87□□□□□ -0.03
RNF40-205ENST00000563909 EXOC1LA0A1B0GW35 172 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 EIF3FO00303 357 aaPredicted RBP14.86□□□□□ -0.03
RNF40-205ENST00000563909 CDK2AP1O14519 115 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 PEX1O43933 1283 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 INHBAP08476 426 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 ENO3P13929 434 aaPredicted RBP14.86□□□□□ -0.03
RNF40-205ENST00000563909 MSH2P43246 934 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 RGS4P49798 205 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 CDKN2DP55273 166 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 POU4F1Q01851 419 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 ACTN3Q08043 901 aaPredicted RBP14.86□□□□□ -0.03
RNF40-205ENST00000563909 PDAP1Q13442 181 aaKnown RBP14.86□□□□□ -0.03
RNF40-205ENST00000563909 GBX1Q14549 363 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 UAP1Q16222 522 aaPredicted RBP14.86□□□□□ -0.03
RNF40-205ENST00000563909 Q5PR19 223 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 LRRC8EQ6NSJ5 796 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 ZNF585AQ6P3V2 769 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 B3GNT6Q6ZMB0 384 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 CNPY4Q8N129 248 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 VWA5B2Q8N398 1253 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 OR2A1Q8NGT9 310 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 HMGCLL1Q8TB92 370 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 CD200R1Q8TD46 325 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 SLC44A1Q8WWI5 657 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 MRRFQ96E11 262 aaKnown RBP14.86□□□□□ -0.03
RNF40-205ENST00000563909 TSPAN17Q96FV3 270 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 FOPNLQ96NB1 174 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 GPR22Q99680 433 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 DPH7Q9BTV6 452 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 SYNPO2LQ9H987 977 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 TRPS1Q9UHF7 1281 aa14.86□□□□□ -0.03
RNF40-205ENST00000563909 KLF13Q9Y2Y9 288 aaPredicted RBP14.86□□□□□ -0.03
RNF40-205ENST00000563909 MTO1Q9Y2Z2 717 aaKnown RBP14.86□□□□□ -0.03
RNF40-205ENST00000563909 OR2A25A4D2G3 310 aa14.85□□□□□ -0.03
RNF40-205ENST00000563909 KRT87PA6NCN2 255 aa14.85□□□□□ -0.03
RNF40-205ENST00000563909 POC1B-GALNT4F8VUJ3 575 aa14.85□□□□□ -0.03
RNF40-205ENST00000563909 SYT5O00445 386 aa14.85□□□□□ -0.03
RNF40-205ENST00000563909 MPC1LP0DKB6 136 aa14.85□□□□□ -0.03
RNF40-205ENST00000563909 CD53P19397 219 aa14.85□□□□□ -0.03
RNF40-205ENST00000563909 SAT1P21673 171 aa14.85□□□□□ -0.03
RNF40-205ENST00000563909 ADH7P40394 386 aa14.85□□□□□ -0.03
RNF40-205ENST00000563909 SERPINB9P50453 376 aa14.85□□□□□ -0.03
RNF40-205ENST00000563909 HLCSP50747 726 aa14.85□□□□□ -0.03
RNF40-205ENST00000563909 TIAL1Q01085 375 aaKnown RBP eCLIP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms