RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 MRPL17Q9NRX2 175 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CGNQ9P2M7 1197 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 TUBGCP4Q9UGJ1 667 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 UBQLN1Q9UMX0 589 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 EXO1Q9UQ84 846 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 C2CD2Q9Y426 696 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 TMEM184BQ9Y519 407 aaPredicted RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 POMT1Q9Y6A1 747 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 FANCMQ8IYD8 2048 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 TECTAO75443 2155 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 A0A0U1RQK1 487 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 ZNF320A2RRD8 509 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 PIRO00625 290 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 SMAD9O15198 467 aaKnown RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 ADAMDEC1O15204 470 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 TEX28O15482 410 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 OGG1O15527 345 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 MBTPS2O43462 519 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 EXTL3O43909 919 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 KCNK5O95279 499 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 CXCL14O95715 111 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 PAX1P15863 534 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 HOXB8P17481 243 aaPredicted RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 GM2AP17900 193 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 ERCC2P18074 760 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 TRIM21P19474 475 aaKnown RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 ARCN1P48444 511 aaKnown RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 CLCN4P51793 760 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 RPL24P83731 157 aaKnown RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 IL11RAQ14626 422 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 TMEM132DQ14C87 1099 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 KNOP1Q1ED39 458 aaKnown RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 CAVIN1Q6NZI2 390 aaKnown RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 ARMCX5Q6P1M9 558 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 IYDQ6PHW0 289 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 ERN2Q76MJ5 926 aaKnown RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 MCEMP1Q8IX19 187 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 SYCP3Q8IZU3 236 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 GPD1LQ8N335 351 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 GUF1Q8N442 669 aaKnown RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 GCSAMQ8N6F7 178 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 NAT8LQ8N9F0 302 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 SUSD6Q92537 303 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 CASP10Q92851 521 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 ALG14Q96F25 216 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 ST6GAL2Q96JF0 529 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 B3GALT6Q96L58 329 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 NAP1L5Q96NT1 182 aaPredicted RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 KLHL5Q96PQ7 755 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 FAM213AQ9BRX8 229 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 AGPAT3Q9NRZ7 376 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 EXOC1Q9NV70 894 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 DMAC2Q9NW81 257 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 ADPRHL2Q9NX46 363 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 ERRFI1Q9UJM3 462 aaPredicted RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 BARX2Q9UMQ3 279 aaPredicted RBP4.54□□□□□ -1.68
LINC00254-201ENST00000563416 CMAHPQ9Y471 501 aa4.54□□□□□ -1.68
LINC00254-201ENST00000563416 MYOFQ9NZM1 2061 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 PTPRJQ12913 1337 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 LOC102723996A0A087X1L8 192 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 TRAV34A0A0B4J273 112 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 GOLGA8IPA6NC78 632 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 GOLGA6L4A6NEF3 574 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 ZNF233A6NK53 670 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 GOLGA8JA6NMD2 632 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 TMEM178BH3BS89 294 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 I3L4J1 428 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 PDXKO00764 312 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 TRAPPC3O43617 180 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 SYNCRIPO60506 623 aaKnown RBP4.53□□□□□ -1.68
LINC00254-201ENST00000563416 FMO6PO60774 539 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 TADA2AO75478 443 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 B3GAT3O94766 335 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 IL9P15248 144 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 EPCAMP16422 314 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 TYMPP19971 482 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 BRCC3P46736 316 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 CCR3P51677 355 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 GPR143P51810 404 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 BPIFB3P59826 476 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 UBE2HP62256 183 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 RUNX1T1Q06455 604 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 SPAG1Q07617 926 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 CYP24A1Q07973 514 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 PNOCQ13519 176 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 MORF4L2Q15014 288 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 CCDC6Q16204 474 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 PSMD5Q16401 504 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 SNRNP35Q16560 246 aaKnown RBP4.53□□□□□ -1.68
LINC00254-201ENST00000563416 HYAL4Q2M3T9 481 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 TYSND1Q2T9J0 566 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 C2orf76Q3KRA6 126 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 ZCWPW2Q504Y3 356 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 SLC8B1Q6J4K2 584 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 ZNF449Q6P9G9 518 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 SHQ1Q6PI26 577 aaKnown RBP4.53□□□□□ -1.68
LINC00254-201ENST00000563416 PRSS55Q6UWB4 352 aaPredicted RBP4.53□□□□□ -1.68
LINC00254-201ENST00000563416 PIWIL3Q7Z3Z3 882 aaKnown RBP4.53□□□□□ -1.68
LINC00254-201ENST00000563416 CBWD2Q8IUF1 395 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms