RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 TRBV23OR9-2A0A075B6M9 112 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 PRSS51A0A1B0GVH4 220 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 LRIT2A6NDA9 550 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 PRORSD1PA6NEY8 169 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 EVPLLA8MZ36 301 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 HAT1O14929 419 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 YKT6O15498 198 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 PIAS2O75928 621 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 LRATO95237 230 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 KLK1P06870 262 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 ZCCHC18P0CG32 403 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 POLR2CP19387 275 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 MAOBP27338 520 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 HTR1EP28566 365 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 HNRNPH1P31943 449 aaKnown RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 BCL6P41182 706 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 FNTBP49356 437 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 CYP4F2P78329 520 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 KLC1Q07866 573 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 C1orf61Q13536 156 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 PDE7AQ13946 482 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 CAPRIN1Q14444 709 aaKnown RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 RCN1Q15293 331 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 ZIC1Q15915 447 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 UGT8Q16880 541 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 DUOXA1Q1HG43 343 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 MTX3Q5HYI7 312 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 PMS2CLQ68D20 193 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 OR4C11Q6IEV9 310 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 DLEU7Q6UYE1 221 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 DHFR2Q86XF0 187 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 PTRH1Q86Y79 214 aaKnown RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 C1orf210Q8IVY1 113 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 KIAA2013Q8IYS2 634 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 CARFQ8N187 725 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 CAMKVQ8NCB2 501 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.24□□□□□ -0.934e-6■■■□□ 18.8
UBFD1-202ENST00000563366 NT5CQ8TCD5 201 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 SLC26A7Q8TE54 656 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 CREB3L4Q8TEY5 395 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 C16orf78Q8WTQ4 265 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 PATE1Q8WXA2 126 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 RSC1A1Q92681 617 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 GAL3ST3Q96A11 431 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 RERGQ96A58 199 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 TMEM125Q96AQ2 219 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 COQ8BQ96D53 544 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 RSRC1Q96IZ7 334 aaKnown RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 EGLN2Q96KS0 407 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 CCDC115Q96NT0 180 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 PANX1Q96RD7 426 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 SLC38A3Q99624 504 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 KCTD14Q9BQ13 255 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 ZFYVE21Q9BQ24 234 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 ECSITQ9BQ95 431 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 SLC39A3Q9BRY0 314 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 EFHD1Q9BUP0 239 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 FAIM2Q9BWQ8 316 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 ABCG4Q9H172 646 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 VCX3BQ9H321 246 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 DDX31Q9H8H2 851 aaKnown RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 COPS7BQ9H9Q2 264 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 FRRS1LQ9P0K9 344 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 ACTR3BQ9P1U1 418 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 ZNF282Q9UDV7 671 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-202ENST00000563366 MAGEL2Q9UJ55 1249 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 POMT2Q9UKY4 750 aa9.24□□□□□ -0.93
UBFD1-202ENST00000563366 PRAMEF33A0A0G2JMD5 474 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 AQP12BA6NM10 295 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SAP18O00422 153 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 TXNDC9O14530 226 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 ACOT8O14734 319 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 NVLO15381 856 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 YY2O15391 372 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 ZSCAN9O15535 394 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 AKAP10O43572 662 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SH3BGRLO75368 114 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 UBXN7O94888 489 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 EPN2O95208 641 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SERPIND1P05546 499 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 CELA2BP08218 269 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 FURINP09958 794 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 EPXP11678 715 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 TDGF1P13385 188 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 DRD2P14416 443 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 TCN1P20061 433 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 DDCP20711 480 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 MAGP20916 626 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 TPP2P29144 1249 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 BSGP35613 385 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 CAPZBP47756 277 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 RXRGP48443 463 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 DHPSP49366 369 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 CSNK1EP49674 416 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 TAS2R50P59544 299 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SKP1P63208 163 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 YBX1P67809 324 aaKnown RBP9.23□□□□□ -0.93
UBFD1-202ENST00000563366 LIPEQ05469 1076 aa9.23□□□□□ -0.93
UBFD1-202ENST00000563366 SLC34A1Q06495 639 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms