RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 GSDMBQ8TAX9 411 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 SLC13A3Q8WWT9 602 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 ASB15Q8WXK1 588 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 NCLNQ969V3 563 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 MRFAP1L1Q96HT8 127 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 PDLIM2Q96JY6 352 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 USB1Q9BQ65 265 aaKnown RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 GOLPH3Q9H4A6 298 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 PROK2Q9HC23 129 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 SH2D2AQ9NP31 389 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 ACKR4Q9NPB9 350 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 ABCF3Q9NUQ8 709 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 ZNF701Q9NV72 531 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 GALNT8Q9NY28 637 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 C6orf203Q9P0P8 240 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 LRRC3CA6NJW4 275 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 ZNF839A8K0R7 811 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 EEF1E1-BLOC1S5C9J1V9 151 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 PJA2O43164 708 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 EEF1E1O43324 174 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 KCNAB3O43448 404 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 TLX2O43763 284 aaPredicted RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 SPOPO43791 374 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 STK10O94804 968 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 ALOX12P18054 663 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 FPR1P21462 350 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 HRH2P25021 359 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 CTSSP25774 331 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 CTNNA2P26232 953 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 OPRM1P35372 400 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 PPARGP37231 505 aaPredicted RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 GRIA1P42261 906 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 SKIV2L2P42285 1042 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 TTPAP49638 278 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 HK2P52789 917 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 ADARP55265 1226 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 EIF3BP55884 814 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 HERC3Q15034 1050 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 SIX1Q15475 284 aaPredicted RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 DEFB134Q4QY38 66 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 AARS2Q5JTZ9 985 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 MEI1Q5TIA1 1274 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 NSUN5P2Q63ZY6 315 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 CAPN13Q6MZZ7 669 aaPredicted RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 DARS2Q6PI48 645 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 SASS6Q6UVJ0 657 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 C20orf204Q6ZNR8 217 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 FAM47EQ6ZV65 393 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 LRRC6Q86X45 466 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 SCUBE1Q8IWY4 988 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 MFSD9Q8NBP5 474 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 KRT35Q92764 455 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 PEX13Q92968 403 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 LRRC45Q96CN5 670 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 NTNG2Q96CW9 530 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 MARK4Q96L34 752 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 FERMT1Q9BQL6 677 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 C19orf24Q9BVV8 132 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 PRDM14Q9GZV8 571 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 FAM114A2Q9NRY5 505 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 SACM1LQ9NTJ5 587 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 CATSPERZQ9NTU4 200 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 TCAF1Q9Y4C2 921 aa7.1□□□□□ -1.27
HERPUD1-206ENST00000563343 CD8B2A6NJW9 211 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 C4orf51C9J302 202 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 GFYI3L273 518 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 WWP2O00308 870 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 CD3EAPO15446 510 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 CTIFO43310 598 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 CD5LO43866 347 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 CATP04040 527 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 SLC35G6P0C7Q6 338 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 FAM157CP0CG43 387 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 SMIM10L1P0DMW3 83 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 ADRA1DP25100 572 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 PTPN7P35236 360 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 PIGAP37287 484 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 NR1H2P55055 460 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 HADHBP55084 474 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 GDF10P55107 478 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 PRAMEP78395 509 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 RUNX1T1Q06455 604 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 CDH17Q12864 832 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 FOXF2Q12947 444 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 C10orf62Q5T681 223 aaPredicted RBP7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 REXO1L1PQ8IX06 675 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 MEIOBQ8N635 442 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 ZNF321PQ8N8H1 164 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 OR8K1Q8NGG5 319 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 UTP15Q8TED0 518 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 ASB11Q8WXH4 323 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 LPGAT1Q92604 370 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 FAM136AQ96C01 138 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 HSPBAP1Q96EW2 488 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 SMIM10Q96HG1 83 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 SGCZQ96LD1 299 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 PANX2Q96RD6 677 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 SLC30A3Q99726 388 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 TIMP4Q99727 224 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 BPIFA3Q9BQP9 254 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms