RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 CLOCKO15516 846 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 SNAI2O43623 268 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 GPC4O75487 556 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 LYNP07948 512 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 PLEKP08567 350 aaPredicted RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 GNAI3P08754 354 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 HBQ1P09105 142 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 MCF2P10911 925 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 KLRC2P26717 231 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CCNG1P51959 295 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 RAB4BP61018 213 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 FGL1Q08830 312 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 KNOP1Q1ED39 458 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 TMEM44Q2T9K0 475 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 TMEM35AQ53FP2 167 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 PHF19Q5T6S3 580 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 ASPHD2Q6ICH7 369 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 FAM151BQ6UXP7 276 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 TRIM46Q7Z4K8 759 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 TRIM69Q86WT6 500 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 ZNF280BQ86YH2 543 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 HIPK1Q86Z02 1210 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CLEC10AQ8IUN9 316 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 OR4N4Q8N0Y3 316 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 ZNF276Q8N554 614 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 TRAM1L1Q8N609 369 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 AMER3Q8N944 861 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 ANKLE1Q8NAG6 615 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 OR13C9Q8NGT0 318 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 ESR2Q92731 530 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 ORAI1Q96D31 301 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 TM4SF19Q96DZ7 209 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CCT8L2Q96SF2 557 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 GPA33Q99795 319 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 TMEM47Q9BQJ4 181 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 IL22Q9GZX6 179 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 WDR76Q9H967 626 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 GPAMQ9HCL2 828 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 TXLNGQ9NUQ3 528 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 PLK2Q9NYY3 685 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 DLGAP2Q9P1A6 1054 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 GDF2Q9UK05 429 aaPredicted RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 SLC6A14Q9UN76 642 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 VWA7Q9Y334 891 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 QSER1Q2KHR3 1735 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 TULP4Q9NRJ4 1543 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 LOC100509620A0A075B734 347 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 GNG14A0A1W2PPG7 69 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CLEC18AA5D8T8 446 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 FAM149AA5PLN7 773 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 METTL21EPA6NDL7 271 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 SRRM3A6NNA2 597 aaPredicted RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 MAGEB17A8MXT2 336 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 MIF4GDA9UHW6 222 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 LINC00587B1AMM8 73 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 NFIBO00712 420 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 NME2P1O60361 137 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 DFFBO76075 338 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 SYPP08247 313 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 RPS17P08708 135 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 FGF5P12034 268 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CEBPBP17676 345 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 SDHAP31040 664 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 SLC19A1P41440 591 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 RAB9AP51151 201 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 IST1P53990 364 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 SULT2A1Q06520 285 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CDH17Q12864 832 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 ITIH4Q14624 930 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 MRPL23Q16540 153 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 CAMK4Q16566 473 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 SMN1Q16637 294 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 GOLGA7BQ2TAP0 167 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 C18orf21Q32NC0 220 aaPredicted RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 EPHA10Q5JZY3 1008 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 HES5Q5TA89 166 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 HIST2H2BCQ6DN03 193 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 HIST2H2BDQ6DRA6 164 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CLEC18BQ6UXF7 455 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 PRRT2Q7Z6L0 340 aaPredicted RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 NUDCD3Q8IVD9 361 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 LRRC56Q8IYG6 542 aaPredicted RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 SHISA5Q8N114 240 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CERS5Q8N5B7 392 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CLEC18CQ8NCF0 446 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 DNAAF1Q8NEP3 725 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 PNPT1Q8TCS8 783 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 PHOSPHO1Q8TCT1 267 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 MCOLN3Q8TDD5 553 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CNOT9Q92600 299 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 PTCD3Q96EY7 689 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 BBS4Q96RK4 519 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 SLC30A3Q99726 388 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 LPAR2Q9HBW0 351 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 CMTM6Q9NX76 183 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 NDE1Q9NXR1 346 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 DNMT3BQ9UBC3 853 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 MRM2Q9UI43 246 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 RNF150Q9ULK6 438 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 GPR132Q9UNW8 380 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms