RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 OR2T5Q6IEZ7 315 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 PAGE2Q7Z2X7 111 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 TRIM69Q86WT6 500 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 NUDT13Q86X67 352 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 TRIML2Q8N7C3 387 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 TMEM145Q8NBT3 493 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 FLCNQ8NFG4 579 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 OR2L3Q8NG85 312 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 OR2T29Q8NH02 315 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 WDR92Q96MX6 357 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 RBM4BQ9BQ04 359 aaKnown RBP18.21■□□□□ 0.51
SMPD3-203ENST00000563226 C17orf62Q9BQA9 187 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 RBM4Q9BWF3 364 aaKnown RBP18.21■□□□□ 0.51
SMPD3-203ENST00000563226 RBM38Q9H0Z9 239 aaKnown RBP18.21■□□□□ 0.51
SMPD3-203ENST00000563226 C1GALT1Q9NS00 363 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 THEGQ9P2T0 379 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 TMEFF2Q9UIK5 374 aaPredicted RBP18.21■□□□□ 0.51
SMPD3-203ENST00000563226 LRP4O75096 1905 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 TRBC2A0A5B9 178 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 CLEC3AO75596 197 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 HOXB6P17509 224 aaKnown RBP18.21■□□□□ 0.51
SMPD3-203ENST00000563226 HNRNPA2B1P22626 353 aaKnown RBP18.21■□□□□ 0.51
SMPD3-203ENST00000563226 CCINQ13939 588 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 IQCCQ4KMZ1 466 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 GCNT6Q5T4J0 391 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 SLC30A9Q6PML9 568 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 ZNF793Q6ZN11 406 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 DENND6BQ8NEG7 585 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 NFKBIDQ8NI38 313 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 ABHD8Q96I13 439 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 DPH7Q9BTV6 452 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 TMEM168Q9H0V1 697 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 TNRC18O15417 2968 aaPredicted RBP18.2■□□□□ 0.5
SMPD3-203ENST00000563226 TRBV23OR9-2A0A075B6M9 112 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 LRIT2A6NDA9 550 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 VILLO15195 856 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 IGFBP4P22692 258 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 YAP1P46937 504 aaKnown RBP18.2■□□□□ 0.5
SMPD3-203ENST00000563226 KCNJ10P78508 379 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 HYAL2Q12891 473 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 EOGTQ5NDL2 527 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 KIAA1614Q5VZ46 1190 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 SHQ1Q6PI26 577 aaKnown RBP18.2■□□□□ 0.5
SMPD3-203ENST00000563226 HMGB4Q8WW32 186 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 TMIGD2Q96BF3 282 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 EPS8L2Q9H6S3 715 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 KIR3DX1Q9H7L2 352 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 TM9SF3Q9HD45 589 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 FAM118AQ9NWS6 357 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 ZNF624Q9P2J8 865 aaPredicted RBP18.2■□□□□ 0.5
SMPD3-203ENST00000563226 EBF1Q9UH73 591 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 MMP17Q9ULZ9 603 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 SNX8Q9Y5X2 465 aa18.2■□□□□ 0.5
SMPD3-203ENST00000563226 TRIM64A6NGJ6 449 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 MYO1GB0I1T2 1018 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 ELK4P28324 431 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 EEF1A2Q05639 463 aaKnown RBP18.19■□□□□ 0.5
SMPD3-203ENST00000563226 KCNAB2Q13303 367 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 SCARB2Q14108 478 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 LRRC32Q14392 662 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 ZIC1Q15915 447 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 OR4C11Q6IEV9 310 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 HIPK1Q86Z02 1210 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 OR4E2Q8NGC2 313 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 ZFP28Q8NHY6 868 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 DNASE1L2Q92874 299 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 EXOSC8Q96B26 276 aaKnown RBP18.19■□□□□ 0.5
SMPD3-203ENST00000563226 C7orf34Q96L11 122 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 RDH12Q96NR8 316 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 TTYH1Q9H313 450 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-203ENST00000563226 DDX31Q9H8H2 851 aaKnown RBP18.19■□□□□ 0.5
SMPD3-203ENST00000563226 ARHGEF17Q96PE2 2063 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-203ENST00000563226 A0A0A6YYD5 115 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 SUV39H1O43463 412 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 MITFO75030 526 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-203ENST00000563226 RASGRP1O95267 797 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 BMP8BP34820 402 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 SSR2P43308 183 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 ALDH3B2P48448 385 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 HEPACAMQ14CZ8 416 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 Q6ZS52 159 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 TSEN54Q7Z6J9 526 aaKnown RBP18.19■□□□□ 0.5
SMPD3-203ENST00000563226 DCP2Q8IU60 420 aaKnown RBP18.19■□□□□ 0.5
SMPD3-203ENST00000563226 ARL10Q8N8L6 244 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 TBC1D20Q96BZ9 403 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 QRFPRQ96P65 431 aa18.19■□□□□ 0.5
SMPD3-203ENST00000563226 WASHC1A8K0Z3 465 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 PDPK1O15530 556 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 TBX19O60806 448 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 PRKRAO75569 313 aaKnown RBP18.18■□□□□ 0.5
SMPD3-203ENST00000563226 TNFRSF1BP20333 461 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 UQCRC2P22695 453 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 GSTT1P30711 240 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 POLR2IP36954 125 aaKnown RBP18.18■□□□□ 0.5
SMPD3-203ENST00000563226 ACTR1BP42025 376 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 ACTR1AP61163 376 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 RPS26P62854 115 aaKnown RBP18.18■□□□□ 0.5
SMPD3-203ENST00000563226 FADDQ13158 208 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 TEAD4Q15561 434 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 WASH2PQ6VEQ5 465 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms