RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 SLC16A5O15375 505 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 KLK8O60259 260 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 SNX3O60493 162 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 LYPLA1O75608 230 aaPredicted RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 TGDSO95455 350 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 ENO2P09104 434 aaPredicted RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 ITGAMP11215 1152 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 NCF1P14598 390 aaPredicted RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 TNFSF10P50591 281 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 ALDH18A1P54886 795 aaKnown RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 ARF3P61204 181 aaPredicted RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 NAA20P61599 178 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 HERVK_113P63132 956 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 OCA2Q04671 838 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 PRTGQ2VWP7 1150 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 FAM214AQ32MH5 1076 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 ZNF678Q5SXM1 525 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 CGB2Q6NT52 195 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 RPUSD3Q6P087 351 aaKnown RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 FBXO42Q6P3S6 717 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 SUSD1Q6UWL2 747 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 UBE2R2Q712K3 238 aaPredicted RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 KBTBD2Q8IY47 623 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 AMER3Q8N944 861 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 CCDC197Q8NCU1 140 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 RELTQ969Z4 430 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 ZUFSPQ96AP4 578 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 CCDC120Q96HB5 630 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 FOPNLQ96NB1 174 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 LMF1Q96S06 567 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 EGFL8Q99944 293 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 DPH7Q9BTV6 452 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 ERVK-6Q9BXR3 956 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 ZNF395Q9H8N7 513 aaPredicted RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 EML4Q9HC35 981 aaKnown RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 UTP6Q9NYH9 597 aaKnown RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 ADAMTS6Q9UKP5 1117 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 RUVBL1Q9Y265 456 aaKnown RBP12.63□□□□□ -0.39
SPG7-207ENST00000563218 KLK4Q9Y5K2 254 aa12.63□□□□□ -0.39
SPG7-207ENST00000563218 A0A1B0GUH1 482 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 P2RX6O15547 441 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 SRPX2O60687 465 aaPredicted RBP12.62□□□□□ -0.39
SPG7-207ENST00000563218 SUPT7LO94864 414 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 WDPCPO95876 746 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 STATHP02808 62 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 HIST1H2AGP0C0S8 130 aaPredicted RBP12.62□□□□□ -0.39
SPG7-207ENST00000563218 HIST1H2ADP20671 130 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 EEF1DP29692 281 aaKnown RBP12.62□□□□□ -0.39
SPG7-207ENST00000563218 EMP2P54851 167 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 SF3A3Q12874 501 aaKnown RBP eCLIP12.62□□□□□ -0.391e-31■■■■□ 22.6
SPG7-207ENST00000563218 SETDB1Q15047 1291 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 PCOLCEQ15113 449 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 PPP1R3AQ16821 1122 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 GFRALQ6UXV0 394 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 NDUFAF7Q7L592 441 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 ARHGEF39Q8N4T4 335 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 ANKS4BQ8N8V4 417 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 PDPRQ8NCN5 879 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 HMGCLL1Q8TB92 370 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 ASB11Q8WXH4 323 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 RAD51AP1Q96B01 352 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 THOC1Q96FV9 657 aaKnown RBP12.62□□□□□ -0.39
SPG7-207ENST00000563218 SEC16BQ96JE7 1060 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 HIST1H2AHQ96KK5 128 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 SORT1Q99523 831 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 HIST1H2AJQ99878 128 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 ZFYVE21Q9BQ24 234 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 H2AFJQ9BTM1 129 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 TRMOQ9BU70 441 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 YIPF2Q9BWQ6 316 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 RAB11FIP5Q9BXF6 653 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 C20orf27Q9GZN8 174 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 NPHS2Q9NP85 383 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 KLHL14Q9P2G3 628 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 TRPC4Q9UBN4 977 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 RAP2CQ9Y3L5 183 aa12.62□□□□□ -0.39
SPG7-207ENST00000563218 TNPO3Q9Y5L0 923 aaKnown RBP12.62□□□□□ -0.39
SPG7-207ENST00000563218 HCFC1P51610 2035 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 TRGV8A0A0C4DH27 118 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 ARHGEF33A8MVX0 844 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 GFYI3L273 518 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 UNC5CO95185 931 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 GUCA1CO95843 209 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 CATP04040 527 aaKnown RBP12.61□□□□□ -0.39
SPG7-207ENST00000563218 SERPINA7P05543 415 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 ANXA5P08758 320 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 KITP10721 976 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 MAT1AQ00266 395 aaKnown RBP12.61□□□□□ -0.39
SPG7-207ENST00000563218 CDKL1Q00532 357 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 PHKG1Q16816 387 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 MUM1Q2TAK8 710 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 UNC50Q53HI1 259 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 ARL13AQ5H913 290 aaPredicted RBP12.61□□□□□ -0.39
SPG7-207ENST00000563218 CDKL4Q5MAI5 379 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 SULT1C3Q6IMI6 304 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 PRMT9Q6P2P2 845 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 FRMD7Q6ZUT3 714 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 PAQR7Q86WK9 346 aa12.61□□□□□ -0.39
SPG7-207ENST00000563218 WDR75Q8IWA0 830 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms