RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 MTTPP55157 894 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 BTG2P78543 158 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 PHEXP78562 749 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 AP5B1Q2VPB7 878 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 KIRREL2Q6UWL6 708 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 RAB43Q86YS6 212 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 ACOT4Q8N9L9 421 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 TMEM52Q8NDY8 209 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 RGMAQ96B86 450 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 TBC1D20Q96BZ9 403 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 CNDP1Q96KN2 507 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 SERINC2Q96SA4 455 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 MAPKAP1Q9BPZ7 522 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 TBCDQ9BTW9 1192 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 ZNF717Q9BY31 904 aaPredicted RBP16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 TRIM55Q9BYV6 548 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 COPS7BQ9H9Q2 264 aaPredicted RBP16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 P4HTMQ9NXG6 502 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 MED13Q9UHV7 2174 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 KCNMB2Q9Y691 235 aa16.46■□□□□ 0.23
CCNDBP1-204ENST00000563065 ZFYVE26Q68DK2 2539 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 GBAP04062 536 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 DHRS4L1P0CG22 281 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 HIST1H1TP22492 207 aaPredicted RBP16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 BSGP35613 385 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 SSR2P43308 183 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 HNRNPFP52597 415 aaKnown RBP16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 LIM2P55344 173 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 SKP1P63208 163 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 TGM3Q08188 693 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 CUL3Q13618 768 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 ABRAXAS2Q15018 415 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 TTMPQ5BVD1 217 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 CLEC6AQ6EIG7 209 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 NIPAL1Q6NVV3 410 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 BORAQ6PGQ7 559 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 PCSK4Q6UW60 755 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 NUDCD3Q8IVD9 361 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 SRFBP1Q8NEF9 429 aaKnown RBP16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 THAP4Q8WY91 577 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 MAGEB10Q96LZ2 347 aaPredicted RBP16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 CATSPER2Q96P56 530 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 CSF3RQ99062 836 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 PAIP2Q9BPZ3 127 aaKnown RBP16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 MRPL1Q9BYD6 325 aaKnown RBP16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 SLC29A3Q9BZD2 475 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 STMN4Q9H169 189 aaPredicted RBP16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 SEMA3GQ9NS98 782 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 PSD3Q9NYI0 1048 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 KCMF1Q9P0J7 381 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 SLC12A4Q9UP95 1085 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 STK38LQ9Y2H1 464 aa16.45■□□□□ 0.22
CCNDBP1-204ENST00000563065 UQCRHLA0A096LP55 91 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 TMEM120BA0PK00 339 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 TM9SF1O15321 606 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 ULK1O75385 1050 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 ZWINTO95229 277 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 KRT6AP02538 564 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 KRT6BP04259 564 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 ENO1P06733 434 aaKnown RBP16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 UQCRHP07919 91 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 RNH1P13489 461 aaKnown RBP16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 KRT6CP48668 564 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 WDR4P57081 412 aaKnown RBP16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 RHAGQ02094 409 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 SLAMF1Q13291 335 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 ARL13AQ5H913 290 aaPredicted RBP16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 LANCL3Q6ZV70 420 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 CUZD1Q86UP6 607 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 FAM47BQ8NA70 645 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 OR6Y1Q8NGX8 325 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 MGARPQ8TDB4 240 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 TSLPQ969D9 159 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 OR1F2PQ96R84 312 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 SERPINI1Q99574 410 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 NPLQ9BXD5 320 aaPredicted RBP16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 ZNF395Q9H8N7 513 aaPredicted RBP16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 FBXW2Q9UKT8 454 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 DAPP1Q9UN19 280 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 FIS1Q9Y3D6 152 aa16.44■□□□□ 0.22
CCNDBP1-204ENST00000563065 A0A088AWK7 358 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 IGHV3-20A0A0C4DH32 117 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 TMPRSS11DO60235 418 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 NPHS1O60500 1241 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 ITGB2P05107 769 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 FAM87AP0C7U9 286 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 ZNF10P21506 573 aaPredicted RBP16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 NAA20P61599 178 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 HMGCS1Q01581 520 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 RHDQ02161 417 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 EEF1A2Q05639 463 aaKnown RBP16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 ASPHQ12797 758 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 CHI3L2Q15782 390 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 AGBL2Q5U5Z8 902 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 OR11G2Q8NGC1 345 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 APOBEC4Q8WW27 367 aaKnown RBP16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 ING2Q9H160 280 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 VIPAS39Q9H9C1 493 aa16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 CLK4Q9HAZ1 481 aaKnown RBP16.43■□□□□ 0.22
CCNDBP1-204ENST00000563065 ZNF446Q9NWS9 450 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms