RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 CNDP1Q96KN2 507 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 QRFPRQ96P65 431 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 LPAR4Q99677 370 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 CENPKQ9BS16 269 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 NPLQ9BXD5 320 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-206ENST00000562610 ROGDIQ9GZN7 287 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 ILKAPQ9H0C8 392 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-206ENST00000562610 PPCSQ9HAB8 311 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 SEMA4BQ9NPR2 832 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-206ENST00000562610 DMRT3Q9NQL9 472 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 MAP10Q9P2G4 905 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 ADGRE2Q9UHX3 823 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 MRPS33Q9Y291 106 aaKnown RBP15.17■□□□□ 0.02
COMMD4-206ENST00000562610 RNF11Q9Y3C5 154 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 PCDHGA11Q9Y5H2 935 aa15.17■□□□□ 0.02
COMMD4-206ENST00000562610 RTCAO00442 366 aaKnown RBP15.16■□□□□ 0.02
COMMD4-206ENST00000562610 OR7A17O14581 309 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 SORBS2O94875 1100 aaKnown RBP15.16■□□□□ 0.02
COMMD4-206ENST00000562610 RPS17P08708 135 aaKnown RBP15.16■□□□□ 0.02
COMMD4-206ENST00000562610 SBK3P0C264 359 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 ICAM2P13598 275 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 HSD17B3P37058 310 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 TMEM35AQ53FP2 167 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 CRB2Q5IJ48 1285 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 KHDRBS2Q5VWX1 349 aaKnown RBP15.16■□□□□ 0.02
COMMD4-206ENST00000562610 IGFL3Q6UXB1 125 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 RPS27LQ71UM5 84 aaKnown RBP15.16■□□□□ 0.02
COMMD4-206ENST00000562610 CYP4X1Q8N118 509 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 AMER2Q8N7J2 671 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 ARMC2Q8NEN0 867 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 IMMP1LQ96LU5 166 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 CSF3RQ99062 836 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 WDR77Q9BQA1 342 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-206ENST00000562610 TBCDQ9BTW9 1192 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 OR51B5Q9H339 312 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 PRDM9Q9NQV7 894 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 B3GNT3Q9Y2A9 372 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 SHANK1Q9Y566 2161 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 BAHCC1Q9P281 2608 aa15.16■□□□□ 0.02
COMMD4-206ENST00000562610 A0A1W2PPM1 405 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 FOXO6A8MYZ6 492 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 H0YIV9 168 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 GLRA3O75311 464 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 GSTA1P08263 222 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 PIK3CBP42338 1070 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 LIM2P55344 173 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 RPS13P62277 151 aaKnown RBP15.15■□□□□ 0.02
COMMD4-206ENST00000562610 TRAF3Q13114 568 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 SLC13A2Q13183 592 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 MFAP5Q13361 173 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 RCN2Q14257 317 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 ZRSR2Q15696 482 aaKnown RBP15.15■□□□□ 0.02
COMMD4-206ENST00000562610 EXT1Q16394 746 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 AP5B1Q2VPB7 878 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 PLAG1Q6DJT9 500 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 TTC19Q6DKK2 380 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-206ENST00000562610 ZNF793Q6ZN11 406 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 L3MBTL4Q8NA19 623 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 Q8NA96 180 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 PPP4R1Q8TF05 950 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 ZBTB26Q9HCK0 441 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 NECTIN3Q9NQS3 549 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 PRDM7Q9NQW5 492 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 PRTFDC1Q9NRG1 225 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 DAPP1Q9UN19 280 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 MMACHCQ9Y4U1 282 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 CSAG2Q9Y5P2 127 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 SPACA6W5XKT8 324 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 CNTRLQ7Z7A1 2325 aa15.15■□□□□ 0.02
COMMD4-206ENST00000562610 TCRBV16S1A1N1A0A5B0 115 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 CDH16O75309 829 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 TSPAN8P19075 237 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 HIST1H1TP22492 207 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-206ENST00000562610 ATP5A1P25705 553 aaKnown RBP15.14■□□□□ 0.01
COMMD4-206ENST00000562610 SOX11P35716 441 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 HNRNPFP52597 415 aaKnown RBP15.14■□□□□ 0.01
COMMD4-206ENST00000562610 CDH13P55290 713 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 HERVK_113P63132 956 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 ARG2P78540 354 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 ZNF33BQ06732 778 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 IGFBP7Q16270 282 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 PRR30Q53SZ7 412 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-206ENST00000562610 B3GNTL1Q67FW5 361 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-206ENST00000562610 UBE3DQ7Z6J8 389 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 TDRPQ86YL5 185 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 IQCKQ8N0W5 287 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 TMEM151AQ8N4L1 468 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 EFCAB3Q8N7B9 438 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 ACOT4Q8N9L9 421 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 TMEM52Q8NDY8 209 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 OR4F6Q8NGB9 312 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 CPT1CQ8TCG5 803 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 ZNF483Q8TF39 744 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-206ENST00000562610 PSMF1Q92530 271 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 RGMAQ96B86 450 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 MTFMTQ96DP5 389 aaKnown RBP15.14■□□□□ 0.01
COMMD4-206ENST00000562610 NTMT1Q9BV86 223 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 SORBS1Q9BX66 1292 aaKnown RBP15.14■□□□□ 0.01
COMMD4-206ENST00000562610 ERVK-6Q9BXR3 956 aa15.14■□□□□ 0.01
COMMD4-206ENST00000562610 KCNK13Q9HB14 408 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms