RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 WFDC11Q8NEX6 87 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 B3GNT7Q8NFL0 401 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 ASB15Q8WXK1 588 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 THAP11Q96EK4 314 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 RMND5BQ96G75 393 aaPredicted RBP10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 CSF3RQ99062 836 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 FOXC2Q99958 501 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 EXO5Q9H790 373 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 TRIM45Q9H8W5 580 aaPredicted RBP10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 PARVBQ9HBI1 364 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 TIMMDC1Q9NPL8 285 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 DMRT3Q9NQL9 472 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 HOMER3Q9NSC5 361 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 HPF1Q9NWY4 346 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 SPRR3Q9UBC9 169 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 FBXO5Q9UKT4 447 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 ACAD8Q9UKU7 415 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 DOCK7Q96N67 2140 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 RTTNQ86VV8 2226 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 TRBC2A0A5B9 178 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 SH3BGRLO75368 114 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 CCL3P10147 92 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 HRH2P25021 359 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 ZFP36L2P47974 494 aaKnown RBP10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 TRPC1P48995 793 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 AGFG1P52594 562 aaKnown RBP10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 ADAM8P78325 824 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 FOLH1Q04609 750 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 LTBQ06643 244 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 SLC13A2Q13183 592 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 BMPR2Q13873 1038 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 POU4F3Q15319 338 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 FBXO48Q5FWF7 155 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 HP1BP3Q5SSJ5 553 aaPredicted RBP10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 FBXW10Q5XX13 1052 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 TMEM198Q66K66 360 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 UGT3A1Q6NUS8 523 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 B3GNT6Q6ZMB0 384 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 PALM2Q8IXS6 379 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 CLYBLQ8N0X4 340 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 MYO1HQ8N1T3 1032 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 TMEM251Q8N6I4 163 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 CHDHQ8NE62 594 aaPredicted RBP10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 SCYL1Q96KG9 808 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 FRMD8P1Q9BZ68 369 aaPredicted RBP10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 TSGA10Q9BZW7 698 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 CXXC4Q9H2H0 198 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 LDAHQ9H6V9 325 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 PLSCR2Q9NRY7 297 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 TUBA8Q9NY65 449 aaPredicted RBP10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 VPS9D1Q9Y2B5 631 aa10.84□□□□□ -0.67
NSMCE1-202ENST00000561960 FN1P02751 2386 aaKnown RBP10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 CUBNO60494 3623 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 KRT14P02533 472 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 IFNA16P05015 189 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 C8GP07360 202 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 ENDOUP21128 410 aaKnown RBP10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 DNASE1P24855 282 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 GABRB3P28472 473 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 HNRNPH1P31943 449 aaKnown RBP10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 PIGAP37287 484 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 KIR2DL3P43628 341 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 SCTRP47872 440 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 CCZ1BP86790 482 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 CCZ1P86791 482 aaPredicted RBP10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 REEP5Q00765 189 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 CSHL1Q14406 222 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 PRAMEF20Q5VT98 475 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 FAM47EQ6ZV65 393 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 ACAD11Q709F0 780 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 CDC20BQ86Y33 519 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 GPATCH11Q8N954 259 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 NT5CQ8TCD5 201 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 SLC5A11Q8WWX8 675 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 VMP1Q96GC9 406 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 SERPINB12Q96P63 405 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 RASL10BQ96S79 203 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 CCDC77Q9BR77 488 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 OR8D2Q9GZM6 311 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 PCBD2Q9H0N5 130 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 RBSNQ9H1K0 784 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 SLC6A15Q9H2J7 730 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 DLL4Q9NR61 685 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 PRTFDC1Q9NRG1 225 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 ZFP69BQ9UJL9 534 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 RPH3AQ9Y2J0 694 aaPredicted RBP10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 EXPH5Q8NEV8 1989 aa10.83□□□□□ -0.68
NSMCE1-202ENST00000561960 TLN2Q9Y4G6 2542 aa10.82□□□□□ -0.68
NSMCE1-202ENST00000561960 NPEPPSL1A6NEC2 478 aa10.82□□□□□ -0.68
NSMCE1-202ENST00000561960 SDR42E2A6NKP2 422 aa10.82□□□□□ -0.68
NSMCE1-202ENST00000561960 ACOT7O00154 380 aa10.82□□□□□ -0.68
NSMCE1-202ENST00000561960 HIST1H2AGP0C0S8 130 aaPredicted RBP10.82□□□□□ -0.68
NSMCE1-202ENST00000561960 RFPL3SP0C7P2 107 aa10.82□□□□□ -0.68
NSMCE1-202ENST00000561960 HIST1H2ADP20671 130 aa10.82□□□□□ -0.68
NSMCE1-202ENST00000561960 BMP5P22003 454 aa10.82□□□□□ -0.68
NSMCE1-202ENST00000561960 CERS1P27544 350 aa10.82□□□□□ -0.68
NSMCE1-202ENST00000561960 GDF5P43026 501 aa10.82□□□□□ -0.68
NSMCE1-202ENST00000561960 MAN2A2P49641 1150 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms