RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 FAM92AA1XBS5 289 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 LRRD1A4D1F6 860 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 GMNCA6NCL1 334 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 IGLON5A6NGN9 336 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 LRRC3CA6NJW4 275 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 A8MXQ7 604 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 APOC4-APOC2K7ER74 178 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 M0QYV0 167 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 M0R3H8 397 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 AP3B1O00203 1094 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 RNF103O00237 685 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 CLIC1O00299 241 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 O00370 1275 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 KPNA3O00505 521 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 NDUFAB1O14561 156 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 MCF2LO15068 1137 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 ALOX15BO15296 676 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 LIASO43766 372 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 NUDT21O43809 227 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 CDH16O75309 829 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 BEST1O76090 585 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 KIAA0754O94854 1291 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 TTC4O95801 387 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 FAM107AO95990 144 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 IGLV2-14P01704 120 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 KRT14P02533 472 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 APOC2P02655 101 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 SRPRAP08240 638 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 GSTA2P09210 222 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 THRAP10827 490 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 PDGFRAP16234 1089 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 WARSP23381 471 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 KDELR1P24390 212 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 SDC4P31431 198 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 RFC1P35251 1148 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 THBS4P35443 961 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 CDKN2BP42772 138 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 CA7P43166 264 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 GPD2P43304 727 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 PTPN9P43378 593 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 RPL34P49207 117 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 CLK3P49761 638 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 BLKP51451 505 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 ARSEP51690 589 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 NDST1P52848 882 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 MAZP56270 477 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 MAP3K7CLP57077 242 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 PFN3P60673 137 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 RPS21P63220 83 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 RAE1P78406 368 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 SARNPP82979 210 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 CDK16Q00536 496 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 CDC16Q13042 620 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 MTA1Q13330 715 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 PDCLQ13371 301 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 XRCC4Q13426 336 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 MFSD13AQ14CX5 517 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 SIX1Q15475 284 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 DEFB113Q30KQ7 82 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 KRT71Q3SY84 523 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 INO80DQ53TQ3 878 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 AWAT1Q58HT5 328 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 FSCBQ5H9T9 825 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 PIP5KL1Q5T9C9 394 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 GKAP1Q5VSY0 366 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 SPOPLQ6IQ16 392 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 LIN54Q6MZP7 749 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 DENND1BQ6P3S1 775 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 FBXO42Q6P3S6 717 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 TMEM71Q6P5X7 295 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 RFWD3Q6PCD5 774 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 Q6ZS92 163 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 NCCRP1Q6ZVX7 275 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 PAQR9Q6ZVX9 377 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 BBS12Q6ZW61 710 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 BCDIN3DQ7Z5W3 292 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 CAMKMTQ7Z624 323 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 YTHDF3Q7Z739 585 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 TDRPQ86YL5 185 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 APCDD1Q8J025 514 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 PDIK1LQ8N165 341 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 WDTC1Q8N5D0 677 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 ARFGAP1Q8N6T3 406 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 BOLLQ8N9W6 283 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 PNLDC1Q8NA58 520 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 FBXO25Q8TCJ0 367 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 BCAS4Q8TDM0 211 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 ADAMTS18Q8TE60 1221 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 CA5BP1Q8WTZ4 195 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 SLC35F5Q8WV83 523 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 TBC1D20Q96BZ9 403 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 LRRC39Q96DD0 335 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 RMND5BQ96G75 393 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 REXO5Q96IC2 774 aaKnown RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 TBATAQ96M53 351 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 CCDC114Q96M63 670 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 GDAP1L1Q96MZ0 367 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 MCEEQ96PE7 176 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 SNX18Q96RF0 628 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 KLF6Q99612 283 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms