RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 DYRK1BQ9Y463 629 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 FAM90A27PA6NNH2 459 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 CES2O00748 559 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 ZFAND5O76080 213 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 GUCA1CO95843 209 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 H2AFXP16104 143 aaPredicted RBP11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 SSR4P51571 173 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 ART1P52961 327 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 HSD17B7P56937 341 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 PMPCAQ10713 525 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 SPANXN3Q5MJ09 141 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 CES4AQ5XG92 561 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 SBSNQ6UWP8 590 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 THOC6Q86W42 341 aaKnown RBP11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 SCUBE1Q8IWY4 988 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 RPRMLQ8N4K4 120 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 PSD4Q8NDX1 1056 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 TSNARE1Q96NA8 513 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 ZNF559Q9BR84 538 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 NAT9Q9BTE0 207 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 NPLQ9BXD5 320 aaPredicted RBP11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 DEFB127Q9H1M4 99 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 DEPPQ9NTK1 212 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 KCMF1Q9P0J7 381 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 CORO1CQ9ULV4 474 aaPredicted RBP11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 ERVK-11Q9UQG0 969 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 VWA7Q9Y334 891 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 CLDN16Q9Y5I7 305 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 KCNE2Q9Y6J6 123 aa11.01□□□□□ -0.65
CARMIL3-204ENST00000561354 INTS1Q8N201 2190 aaKnown RBP11□□□□□ -0.65
CARMIL3-204ENST00000561354 OR14I1A6ND48 311 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 SYNDIG1LA6NDD5 238 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 C4orf51C9J302 202 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 ACOT7O00154 380 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 CLDN4O14493 209 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 PDE9AO76083 593 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 NUP107P57740 925 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 STXBP1P61764 594 aaKnown RBP11□□□□□ -0.65
CARMIL3-204ENST00000561354 PPIAP62937 165 aaKnown RBP11□□□□□ -0.65
CARMIL3-204ENST00000561354 RBBP5Q15291 538 aaKnown RBP11□□□□□ -0.65
CARMIL3-204ENST00000561354 PPP1R3AQ16821 1122 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 GXYLT1Q4G148 440 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 TOR1AIP1Q5JTV8 583 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 TEX35Q5T0J7 233 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 RNASEH2BQ5TBB1 312 aaKnown RBP11□□□□□ -0.65
CARMIL3-204ENST00000561354 HECTD2Q5U5R9 776 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 FAM45BPQ6NSW5 357 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 TMPRSS11BQ86T26 416 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 CCDC71Q8IV32 467 aaPredicted RBP11□□□□□ -0.65
CARMIL3-204ENST00000561354 CLYBLQ8N0X4 340 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 FAM45AQ8TCE6 357 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 NCLNQ969V3 563 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 GAL3ST3Q96A11 431 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 CERS2Q96G23 380 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 SEC16BQ96JE7 1060 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 FAR2Q96K12 515 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 PBKQ96KB5 322 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 CCDC77Q9BR77 488 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 AICDAQ9GZX7 198 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 ZDHHC11Q9H8X9 412 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 ADAP2Q9NPF8 381 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 PRTFDC1Q9NRG1 225 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 PNO1Q9NRX1 252 aaKnown RBP11□□□□□ -0.65
CARMIL3-204ENST00000561354 MYOTQ9UBF9 498 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 SLC22A14Q9Y267 594 aa11□□□□□ -0.65
CARMIL3-204ENST00000561354 PHF3Q92576 2039 aaKnown RBP11□□□□□ -0.65
CARMIL3-204ENST00000561354 TACC2O95359 2948 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 SETD2Q9BYW2 2564 aaPredicted RBP10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 FAM221AA4D161 298 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 PINLYPA6NC86 204 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 TMEM200CA6NKL6 621 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 A8MVJ9 347 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 TGFBR3LH3BV60 316 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 BCKDKO14874 412 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 ATP8B1O43520 1251 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 KLK8O60259 260 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 PRKNO60260 465 aaPredicted RBP10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 OR2J2O76002 312 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 GLSO94925 669 aaPredicted RBP10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 GSTM2P28161 218 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 DNAJA1P31689 397 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 NR0B1P51843 470 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 RAB38P57729 211 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 BTN3A2P78410 334 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 CDKL1Q00532 357 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 SLC13A2Q13183 592 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 RUNX2Q13950 521 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 ELAVL1Q15717 326 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 XKR6Q5GH73 641 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 TEDDM1Q5T9Z0 273 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 NDUFAF5Q5TEU4 345 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 SLC22A16Q86VW1 577 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 TMEM200AQ86VY9 491 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 ZNF595Q8IYB9 648 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 LRRN4CLQ8ND94 238 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 TTLQ8NG68 377 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 OR2M7Q8NG81 312 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 OR5M3Q8NGP4 307 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 GRK7Q8WTQ7 553 aa10.99□□□□□ -0.65
CARMIL3-204ENST00000561354 ASB15Q8WXK1 588 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms