RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 FOXA1P55317 472 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 BTN3A2P78410 334 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 MAT1AQ00266 395 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 DDX39BQ13838 428 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 ERV3-1Q14264 604 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 SYT16Q17RD7 645 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 AP5B1Q2VPB7 878 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 TUBB8Q3ZCM7 444 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 TTMPQ5BVD1 217 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 ARL13AQ5H913 290 aaPredicted RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 CES4AQ5XG92 561 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 MRM1Q6IN84 353 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 TMEM205Q6UW68 189 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 ZNF793Q6ZN11 406 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 GPR155Q7Z3F1 870 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 TRIM46Q7Z4K8 759 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 LAPTM4BQ86VI4 370 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 RAB43Q86YS6 212 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 APLFQ8IW19 511 aaPredicted RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 CA13Q8N1Q1 262 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 METTL4Q8N3J2 472 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 RNF175Q8N4F7 328 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 ACOT4Q8N9L9 421 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 OR5T3Q8NGG3 340 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 ADAMTS18Q8TE60 1221 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 SELENOMQ8WWX9 145 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 TBC1D20Q96BZ9 403 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 MTFMTQ96DP5 389 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 C11orf24Q96F05 449 aaPredicted RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 METTL2AQ96IZ6 378 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 EML4Q9HC35 981 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 TNFRSF12AQ9NP84 129 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 LANCL2Q9NS86 450 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 FARSBQ9NSD9 589 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 SIRT5Q9NXA8 310 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 AHSPQ9NZD4 102 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 HAO1Q9UJM8 370 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 DAPP1Q9UN19 280 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 POLHQ9Y253 713 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 ITPR1Q14643 2758 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 ATMQ13315 3056 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 BLACEA4D250 179 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 IDSB3KWA1 339 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 CYR61O00622 381 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 SERPINE1P05121 402 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 CHRNGP07510 517 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 FHP07954 510 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 JAK1P23458 1154 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 PRPH2P23942 346 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 CCR10P46092 362 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 EFNA3P52797 238 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 EMP2P54851 167 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 LIM2P55344 173 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 RAB38P57729 211 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 CXADRP78310 365 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 RHAGQ02094 409 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 TBL3Q12788 808 aaKnown RBP9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 COL9A2Q14055 689 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 ABRAXAS2Q15018 415 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 COL28A1Q2UY09 1125 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 UGT3A2Q3SY77 523 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 HHATQ5VTY9 493 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 KANK2Q63ZY3 851 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 ATG14Q6ZNE5 492 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 QSOX2Q6ZRP7 698 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 ZCCHC23Q6ZST2 131 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 PPP1R32Q7Z5V6 425 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 CUZD1Q86UP6 607 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 TMEM151BQ8IW70 566 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 KIRREL3Q8IZU9 778 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 CLYBLQ8N0X4 340 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 TMEM102Q8N9M5 508 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 C7orf57Q8NEG2 295 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 RAB3IL1Q8TBN0 382 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 CHTF18Q8WVB6 975 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 ZBTB9Q96C00 473 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 PEX11GQ96HA9 241 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 KCNA7Q96RP8 456 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 CRB3Q9BUF7 120 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 ACBD3Q9H3P7 528 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 SOX17Q9H6I2 414 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 COPS7BQ9H9Q2 264 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 MS4A12Q9NXJ0 267 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 HCN3Q9P1Z3 774 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 VPS29Q9UBQ0 182 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 C3orf18Q9UK00 162 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 CCL27Q9Y4X3 112 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 TIMM22Q9Y584 194 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 HS3ST3B1Q9Y662 390 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 NBEAQ8NFP9 2946 aa9.08□□□□□ -0.96
RABGGTA-221ENST00000561055 IGKV3D-11A0A0A0MRZ8 115 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 A0A0A6YYD5 115 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 A0A0G2JN53 185 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 SYNDIG1LA6NDD5 238 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 ZNF860A6NHJ4 632 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 RTCAO00442 366 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 SOCS6O14544 535 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 KLF11O14901 512 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 AZIN1O14977 448 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms