RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 AMZ1Q400G9 498 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 LRIF1Q5T3J3 769 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 GPRC6AQ5T6X5 926 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 KCTD9Q7L273 389 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 RHEBL1Q8TAI7 183 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 MAFIPQ8WZ33 124 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 CCSER2Q9H7U1 834 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 ENY2Q9NPA8 101 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 C19orf25Q9UFG5 118 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 MAFFQ9ULX9 164 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 LIPT1Q9Y234 373 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 Q9Y3F1 56 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 TMEM88BA6NKF7 163 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 ABRAXAS2Q15018 415 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 TBRG1Q3YBR2 411 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 ZNF776Q68DI1 518 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 HAGHLQ6PII5 290 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 RNF130Q86XS8 419 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 UBQLNLQ8IYU4 475 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 CELF5Q8N6W0 485 aaKnown RBP12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 POGLUT1Q8NBL1 392 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 ORAI3Q9BRQ5 295 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 KLRF1Q9NZS2 232 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 GSKIPQ9P0R6 139 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 PCDHB3Q9Y5E6 796 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 A8MUA0 341 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 RFPL1O75677 317 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 HRH2P25021 359 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 RAB8AP61006 207 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 CRHR2Q13324 411 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 PIGGQ5H8A4 983 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 C6orf183Q5T699 404 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 Q6ZVU0 165 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 SAMD12Q8N8I0 201 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 GALNT6Q8NCL4 622 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 TSTD1Q8NFU3 115 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 NEIL3Q8TAT5 605 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 TCEAL3Q969E4 200 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 TAS2R9Q9NYW1 312 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 TRIM64A6NGJ6 449 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 CLEC3AO75596 197 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 FGF3P11487 239 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 MAP2K3P46734 347 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 DCDC5Q6ZRR9 648 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 MARVELD2Q8N4S9 558 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 CASTOR1Q8WTX7 329 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 SLC5A7Q9GZV3 580 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 LIN28AQ9H9Z2 209 aaKnown RBP12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 HHATLQ9HCP6 504 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 PRODH2Q9UF12 536 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 LOC100509620A0A075B734 347 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 SLC16A5O15375 505 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 SOCS5O75159 536 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 PPM1BO75688 479 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 CSF2P04141 144 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 KLK3P07288 261 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 GSTM2P28161 218 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 HTR2AP28223 471 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 GRIA2P42262 883 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 FXYD6P3P58550 94 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 RPA4Q13156 261 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 GPR17Q13304 367 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 CLCA4Q14CN2 919 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 BTBD16Q32M84 506 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 INAVAQ3KP66 663 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 P4HA3Q7Z4N8 544 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 UBE2Q1Q7Z7E8 422 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 GLIS1Q8NBF1 620 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 TMEM234Q8WY98 164 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 KCNN3Q9UGI6 736 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 ACSL5Q9ULC5 683 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 FARSAQ9Y285 508 aaKnown RBP12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 HSPE1-MOB4S4R3N1 261 aa12.74□□□□□ -0.37
CSPG4P11-201ENST00000560634 GLTPD2A6NH11 291 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 RASAL1O95294 804 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 BPNT1O95861 308 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 MAGEA11P43364 429 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 OGDHQ02218 1023 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 C2orf27AQ580R0 203 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 NOXRED1Q6NXP6 359 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 C3orf33Q6P1S2 294 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 C22orf39Q6P5X5 142 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 LRRN1Q6UXK5 716 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 NECAB3Q96P71 396 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 DOHHQ9BU89 302 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 UBQLN2Q9UHD9 624 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 SOBPA7XYQ1 873 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 CHRNA1P02708 482 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 KCNQ1P51787 676 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 PCBP2Q15366 365 aaKnown RBP eCLIP12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 PQLC3Q8N755 202 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 OR2T33Q8NG76 320 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 OR4K14Q8NGD5 310 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 OR51G2Q8NGK0 314 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 NPLQ9BXD5 320 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 FBRSL1Q9HCM7 1045 aaKnown RBP12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 LRRTM2O43300 516 aa12.73□□□□□ -0.37
CSPG4P11-201ENST00000560634 ARL3P36405 182 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms