RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CCNG1P51959 295 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 RAB38P57729 211 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 RUNX2Q13950 521 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 RCN2Q14257 317 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 AP5B1Q2VPB7 878 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 ADPRMQ3LIE5 342 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 TMEM35AQ53FP2 167 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 PRR30Q53SZ7 412 aaPredicted RBP12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 B3GNTL1Q67FW5 361 aaPredicted RBP12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 PLAG1Q6DJT9 500 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 ABHD17CQ6PCB6 329 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 QSOX2Q6ZRP7 698 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 LAS2Q8IYD9 372 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 RNF175Q8N4F7 328 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 CISD2Q8N5K1 135 aaKnown RBP12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 AMER2Q8N7J2 671 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 EIF1ADQ8N9N8 165 aaKnown RBP12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 Q8NA96 180 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 HUS1BQ8NHY5 278 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 ZNF473Q8WTR7 871 aaKnown RBP12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 CMTM7Q96FZ5 175 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 IMMP1LQ96LU5 166 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 CDK15Q96Q40 435 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 LMF1Q96S06 567 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 OR51B5Q9H339 312 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 PLA2G3Q9NZ20 509 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 STMN3Q9NZ72 180 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 ADGRE2Q9UHX3 823 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 SPACA6W5XKT8 324 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 RTCAO00442 366 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 CLDN9O95484 217 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 KRT15P19012 456 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 SLCO1A2P46721 670 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 LIM2P55344 173 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 TAS2R50P59544 299 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 ZNF169Q14929 603 aaPredicted RBP12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 TLR1Q15399 786 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 KHDRBS2Q5VWX1 349 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 FCRLBQ6BAA4 426 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 METTL2BQ6P1Q9 378 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 TIFABQ6ZNK6 161 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 Q6ZS92 163 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 CLNKQ7Z7G1 428 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 CUZD1Q86UP6 607 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 CATSPER1Q8NEC5 780 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 OR1N1Q8NGS0 311 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 SUN3Q8TAQ9 357 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 M1APQ8TC57 530 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 ADAMTS18Q8TE60 1221 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 PSMF1Q92530 271 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 MIB2Q96AX9 1013 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 RGMAQ96B86 450 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 MTFMTQ96DP5 389 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 QRFPRQ96P65 431 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 TBCDQ9BTW9 1192 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 MS4A8Q9BY19 250 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 TXLNGYQ9BZA5 131 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 SLC29A3Q9BZD2 475 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 SEMA4BQ9NPR2 832 aaPredicted RBP12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 NECTIN3Q9NQS3 549 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 PRTFDC1Q9NRG1 225 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 PNO1Q9NRX1 252 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 ABI3Q9P2A4 366 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 PCTPQ9UKL6 214 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 DAPP1Q9UN19 280 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 RNF11Q9Y3C5 154 aa12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 COPG1Q9Y678 874 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 HELZ2Q9BYK8 2649 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-209ENST00000560620 A8MT66 165 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 STX16-NPEPL1H3BU86 382 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 STX16O14662 325 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 UGDHO60701 494 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 TBX6O95947 436 aaPredicted RBP12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 IFNA16P05015 189 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 PYGBP11216 843 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 ATP5A1P25705 553 aaKnown RBP12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 PIK3CBP42338 1070 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 SLC26A5P58743 744 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 RPS13P62277 151 aaKnown RBP12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 PCDH1Q08174 1060 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 E2F2Q14209 437 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 ZRSR2Q15696 482 aaKnown RBP12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 DEPDC1Q5TB30 811 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 OR4C11Q6IEV9 310 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 IGFL2Q6UWQ7 119 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 RPS27LQ71UM5 84 aaKnown RBP12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 CNPY4Q8N129 248 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 SLC5A8Q8N695 610 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 ACOT4Q8N9L9 421 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 OR52B6Q8NGF0 335 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 SNRNP40Q96DI7 357 aaKnown RBP12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 C19orf60Q96EN9 201 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 ZNF354BQ96LW1 612 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 NSUN5Q96P11 429 aaKnown RBP12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 DMRT3Q9NQL9 472 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 PRDM7Q9NQW5 492 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 TMEM216Q9P0N5 145 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 FETUBQ9UGM5 382 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms