RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 F7P08709 466 aaPredicted RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 GPX2P18283 190 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ENDOUP21128 410 aaKnown RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 NR4A1P22736 598 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 CPN2P22792 545 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 GADD45AP24522 165 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 HOXD9P28356 352 aaPredicted RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 CD6P30203 668 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ACVRL1P37023 503 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 MASP1P48740 699 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 DAPP51397 102 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 SMIM11AP58511 58 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ZXDBP98169 803 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 IFITM2Q01629 132 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 SLC10A7Q0GE19 358 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 CDH18Q13634 790 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 BOP1Q14137 746 aaKnown RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ZDHHC20Q5W0Z9 365 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 IL31Q6EBC2 164 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 RETSATQ6NUM9 610 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 LETMD1Q6P1Q0 360 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 GDPD3Q7L5L3 318 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 VN1R5Q7Z5H4 357 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ZBTB46Q86UZ6 589 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 BBS7Q8IWZ6 715 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ENTHD1Q8IYW4 607 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 CFAP52Q8N1V2 620 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 LINC00471Q8N535 108 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 CLDN22Q8N7P3 220 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 BEND7Q8N7W2 519 aaPredicted RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 TTC16Q8NEE8 873 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 LPCAT1Q8NF37 534 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ENKURQ8TC29 256 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 CD200R1Q8TD46 325 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 FRS2Q8WU20 508 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 FAM3CQ92520 227 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ATOH1Q92858 354 aaPredicted RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 WBP2Q969T9 261 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 MYEOVQ96EZ4 313 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 PSKH2Q96QS6 385 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 TMEM246Q9BRR3 403 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 C2orf49Q9BVC5 232 aaPredicted RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 MND1Q9BWT6 205 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 CDADC1Q9BWV3 514 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 BTBD2Q9BX70 525 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 MKRN2Q9H000 416 aaKnown RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ELOVL6Q9H5J4 265 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 C8orf33Q9H7E9 229 aaPredicted RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ZBTB20Q9HC78 741 aaPredicted RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 SMURF1Q9HCE7 757 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 LTB4R2Q9NPC1 389 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 SLAMF8Q9P0V8 285 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 GIMAP2Q9UG22 337 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 NUP50Q9UKX7 468 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 RAB23Q9ULC3 237 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF490Q9ULM2 529 aaPredicted RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 NDRG2Q9UN36 371 aaKnown RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 SSR3Q9UNL2 185 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 RBMX2Q9Y388 322 aaKnown RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 PTGDR2Q9Y5Y4 395 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 USP9XQ93008 2570 aaPredicted RBP8.21□□□□□ -1.09
CCDC33-209ENST00000560565 COL4A3Q01955 1670 aa8.21□□□□□ -1.09
CCDC33-209ENST00000560565 CKAP5Q14008 2032 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 KRT87PA6NCN2 255 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 NCF1BA6NI72 391 aaPredicted RBP8.21□□□□□ -1.1
CCDC33-209ENST00000560565 NCF1CA8MVU1 366 aaPredicted RBP8.21□□□□□ -1.1
CCDC33-209ENST00000560565 MAGEB17A8MXT2 336 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 C9JVG2 144 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 J3KR12 359 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 TNFRSF11BO00300 401 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 MANBAO00462 879 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 KPNA5O15131 536 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 SLC16A5O15375 505 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 SEC14L5O43304 696 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 TSPAN3O60637 253 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 STK16O75716 305 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 TSPAN12O95859 305 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 HIST1H2AGP0C0S8 130 aaPredicted RBP8.21□□□□□ -1.1
CCDC33-209ENST00000560565 PRKAR1AP10644 381 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 HIST1H2ADP20671 130 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 ITGALP20701 1170 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 CXCR2P25025 360 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 MC4RP32245 332 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 CA5AP35218 305 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 VASPP50552 380 aaPredicted RBP8.21□□□□□ -1.1
CCDC33-209ENST00000560565 GZMMP51124 257 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 DGKQP52824 942 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 AP2S1P53680 142 aaPredicted RBP8.21□□□□□ -1.1
CCDC33-209ENST00000560565 TIAL1Q01085 375 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC33-209ENST00000560565 MRPL28Q13084 256 aaKnown RBP8.21□□□□□ -1.1
CCDC33-209ENST00000560565 MTAPQ13126 283 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 TARDBPQ13148 414 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC33-209ENST00000560565 SP140Q13342 867 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 ABRAXAS2Q15018 415 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 TMEM44Q2T9K0 475 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 HKDC1Q2TB90 917 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 ITPRIPL2Q3MIP1 535 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 GPR33Q49SQ1 333 aa8.21□□□□□ -1.1
CCDC33-209ENST00000560565 IQCCQ4KMZ1 466 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms