RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 MS4A6EQ96DS6 147 aa16.21■□□□□ 0.19
CRTC3-208ENST00000560098 CCDC77Q9BR77 488 aa16.21■□□□□ 0.19
CRTC3-208ENST00000560098 CTNNAL1Q9UBT7 734 aa16.21■□□□□ 0.19
CRTC3-208ENST00000560098 CLDN16Q9Y5I7 305 aa16.21■□□□□ 0.19
CRTC3-208ENST00000560098 POLQO75417 2590 aa16.21■□□□□ 0.18
CRTC3-208ENST00000560098 ANKRD17O75179 2603 aaKnown RBP16.21■□□□□ 0.18
CRTC3-208ENST00000560098 A0A088AWK7 358 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 ZFAND5O76080 213 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 ZNF10P21506 573 aaPredicted RBP16.2■□□□□ 0.18
CRTC3-208ENST00000560098 GSTM2P28161 218 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 PPP2R1BP30154 601 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 SLC6A12P48065 614 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 SSR4P51571 173 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 GPR143P51810 404 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 ARL4CP56559 192 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 RAB38P57729 211 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 TAS2R39P59534 338 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 GPR85P60893 370 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 SLC13A2Q13183 592 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 C18orf21Q32NC0 220 aaPredicted RBP16.2■□□□□ 0.18
CRTC3-208ENST00000560098 MEX3BQ6ZN04 569 aaKnown RBP16.2■□□□□ 0.18
CRTC3-208ENST00000560098 ANKRD49Q8WVL7 239 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 RHBDF1Q96CC6 855 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 SEC16BQ96JE7 1060 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 TIMMDC1Q9NPL8 285 aa16.2■□□□□ 0.18
CRTC3-208ENST00000560098 MRPS33Q9Y291 106 aaKnown RBP16.2■□□□□ 0.18
CRTC3-208ENST00000560098 YARS2Q9Y2Z4 477 aaKnown RBP16.2■□□□□ 0.18
CRTC3-208ENST00000560098 TGFBR3LH3BV60 316 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 B3GALT2O43825 422 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 TUBB4AP04350 444 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 HNRNPFP52597 415 aaKnown RBP16.19■□□□□ 0.18
CRTC3-208ENST00000560098 TLE4Q04727 773 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 TMEM211Q6ICI0 200 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 ARHGAP11AQ6P4F7 1023 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 CEP128Q6ZU80 1094 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 ANKMY2Q8IV38 441 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 ZNF595Q8IYB9 648 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 KRT78Q8N1N4 520 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 MARVELD2Q8N4S9 558 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 FAM47BQ8NA70 645 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 TMEM52Q8NDY8 209 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 VPS39Q96JC1 886 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 QRFPRQ96P65 431 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 TREX2Q9BQ50 279 aaPredicted RBP16.19■□□□□ 0.18
CRTC3-208ENST00000560098 NT5DC2Q9H857 520 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 ADAP2Q9NPF8 381 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 PLSCR2Q9NRY7 297 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 MOCS1Q9NZB8 636 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 KCMF1Q9P0J7 381 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 ERVK-11Q9UQG0 969 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 HRH3Q9Y5N1 445 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 CACNA1CQ13936 2221 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 GTF3C1Q12789 2109 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 ANKDD1BA6NHY2 528 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 A8MVJ9 347 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 ZSCAN12O43309 604 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 PRKNO60260 465 aaPredicted RBP16.19■□□□□ 0.18
CRTC3-208ENST00000560098 CLEC3AO75596 197 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 PDE9AO76083 593 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 TCP1P17987 556 aaKnown RBP16.19■□□□□ 0.18
CRTC3-208ENST00000560098 HPDP32754 393 aaPredicted RBP16.19■□□□□ 0.18
CRTC3-208ENST00000560098 PLA2G16P53816 162 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 RIPPLY3P57055 190 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 DR1Q01658 176 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 TGFBIQ15582 683 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 TRIM40Q6P9F5 258 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 C16orf47Q6ZP98 133 aaPredicted RBP16.19■□□□□ 0.18
CRTC3-208ENST00000560098 GPALPP1Q8IXQ4 340 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 KLHL7Q8IXQ5 586 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 TMEM132CQ8N3T6 1108 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 OR2L5Q8NG80 312 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 OR52N2Q8NGI0 321 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 CAPS2Q9BXY5 557 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 PITHD1Q9GZP4 211 aaPredicted RBP16.19■□□□□ 0.18
CRTC3-208ENST00000560098 REXO4Q9GZR2 422 aaKnown RBP16.19■□□□□ 0.18
CRTC3-208ENST00000560098 TP63Q9H3D4 680 aaPredicted RBP16.19■□□□□ 0.18
CRTC3-208ENST00000560098 POPDC3Q9HBV1 291 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 MCCC2Q9HCC0 563 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 HPF1Q9NWY4 346 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 GPRC5BQ9NZH0 403 aa16.19■□□□□ 0.18
CRTC3-208ENST00000560098 F8P00451 2351 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 CCDC168Q8NDH2 2452 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 SYNDIG1LA6NDD5 238 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 NCF1BA6NI72 391 aaPredicted RBP16.18■□□□□ 0.18
CRTC3-208ENST00000560098 TMEM200CA6NKL6 621 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 USP27XA6NNY8 438 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 NCF1CA8MVU1 366 aaPredicted RBP16.18■□□□□ 0.18
CRTC3-208ENST00000560098 OR2J2O76002 312 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 TBX6O95947 436 aaPredicted RBP16.18■□□□□ 0.18
CRTC3-208ENST00000560098 NCF1P14598 390 aaPredicted RBP16.18■□□□□ 0.18
CRTC3-208ENST00000560098 BMPR2Q13873 1038 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 ELAVL1Q15717 326 aaKnown RBP16.18■□□□□ 0.18
CRTC3-208ENST00000560098 ADPRMQ3LIE5 342 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 CLNKQ7Z7G1 428 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 PSD4Q8NDX1 1056 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 FBXO36Q8NEA4 188 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 ASB5Q8WWX0 329 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 ASB15Q8WXK1 588 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 RUNDC3BQ96NL0 473 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 SERINC2Q96SA4 455 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms