RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 RRP7BPQ9NSQ0 103 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 THUMPD1Q9NXG2 353 aaKnown RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ALKBH4Q9NXW9 302 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 BTG4Q9NY30 223 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 WSB2Q9NYS7 404 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR6C3Q9NZP0 311 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SEMA5BQ9P283 1151 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ANKFY1Q9P2R3 1169 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 HEY2Q9UBP5 337 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 FBXL17Q9UF56 701 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 DBR1Q9UK59 544 aaKnown RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ADAM21Q9UKJ8 722 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 NENFQ9UMX5 172 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 NIP7Q9Y221 180 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 EXOGQ9Y2C4 368 aaKnown RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACOT9Q9Y305 439 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 TNFRSF18Q9Y5U5 241 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CPQQ9Y646 472 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 RB1CC1Q8TDY2 1594 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 NUP160Q12769 1436 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 FHOD3Q2V2M9 1422 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 MIA2Q96PC5 1412 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 NUP155O75694 1391 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 NID2Q14112 1375 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 KIAA0232Q92628 1395 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 SF3B1O75533 1304 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 A0A087X1B8 175 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM172BPA6NC97 362 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 C2orf78A6NCI8 922 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 PRAMEF25A6NGN4 478 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 C5orf52A6NGY3 159 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMEM238C9JI98 176 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 C1QTNF3-AMACRE9PGA6 284 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 H7C0C1 242 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 BCKDKO14874 412 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 LDLRAD4O15165 306 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACOX3O15254 700 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC31A2O15432 143 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 MAGEB2O15479 319 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 TLX3O43711 291 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 KLK8O60259 260 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 CSO75390 466 aaKnown RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 SAP30O75446 220 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 NDUFS3O75489 264 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 CNTN5O94779 1100 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 TJP3O95049 919 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 SEC24AO95486 1093 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 FADS2O95864 444 aaKnown RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 GSTA1P08263 222 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM228BP0C875 321 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 HSPD1P10809 573 aaKnown RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF12P17014 697 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 TPH1P17752 444 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 HK1P19367 917 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 UGT1A1P22309 533 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACKR3P25106 362 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 G0S2P27469 103 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 SDHAP31040 664 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 CXCR5P32302 372 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 CDH5P33151 784 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 CPOXP36551 454 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 ARR3P36575 388 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 SERPINB5P36952 375 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 CTSKP43235 329 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 RPS5P46782 204 aaKnown RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 NUMBP49757 651 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 NDUFV1P49821 464 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 RASSF2P50749 326 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 RPS6P62753 249 aaKnown RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 CDC42EP1Q00587 391 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 IRF8Q02556 426 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 NHLH1Q02575 133 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 BST1Q10588 318 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 GAGE1Q13065 139 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 PDIA2Q13087 525 aaKnown RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 PTPRCAPQ14761 206 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 PTGR1Q14914 329 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 KIR3DS1Q14943 382 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 LTB4RQ15722 352 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 ME3Q16798 604 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 IMPG1Q17R60 797 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 DEFB115Q30KQ5 88 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 UGT3A2Q3SY77 523 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 PLEKHN1Q494U1 663 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 PTPN20Q4JDL3 420 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 LRRC24Q50LG9 513 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACTBL2Q562R1 376 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 XKR7Q5GH72 579 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 MFSD14BQ5SR56 506 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 LRIF1Q5T3J3 769 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR2G6Q5TZ20 316 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 HLA-DQA1Q5Y7H0 255 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 FBXO42Q6P3S6 717 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM199XQ6PEV8 388 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 FBXO46Q6PJ61 603 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 CWC27Q6UX04 472 aaKnown RBP4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 NHLRC1Q6VVB1 395 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 ARCQ7LC44 396 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 PRUNE1Q86TP1 453 aa4.3□□□□□ -1.72
HMGB3P26-201ENST00000560051 ANKRD46Q86W74 232 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms