RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 ATP5A1P25705 553 aaKnown RBP9.53□□□□□ -0.88
USP3-216ENST00000559873 CERS1P27544 350 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 MAPK1P28482 360 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 BUD31P41223 144 aaPredicted RBP9.53□□□□□ -0.88
USP3-216ENST00000559873 GSTM5P46439 218 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 HTR6P50406 440 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 RPL14P50914 215 aaKnown RBP9.53□□□□□ -0.88
USP3-216ENST00000559873 RAB38P57729 211 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 MAT1AQ00266 395 aaKnown RBP9.53□□□□□ -0.88
USP3-216ENST00000559873 NR6A1Q15406 480 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 NKG7Q16617 165 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 MINDY4Q4G0A6 757 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 CRTC2Q53ET0 693 aaPredicted RBP9.53□□□□□ -0.88
USP3-216ENST00000559873 SPDYAQ5MJ70 313 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 MFSD4BQ5TF39 518 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 CCDC81Q6ZN84 652 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 COX15Q7KZN9 410 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 PRSS41Q7RTY9 318 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 TRIM46Q7Z4K8 759 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 VASH2Q86V25 355 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 CRLF3Q8IUI8 442 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 CA13Q8N1Q1 262 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 METTL4Q8N3J2 472 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 ZNF781Q8N8C0 355 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 AMER3Q8N944 861 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 ACOT4Q8N9L9 421 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 OR2Y1Q8NGV0 311 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 FAM76AQ8TAV0 307 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 STT3BQ8TCJ2 826 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.53□□□□□ -0.88
USP3-216ENST00000559873 TBC1D20Q96BZ9 403 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 PPP3R2Q96LZ3 170 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 MAGEB18Q96M61 343 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 IP6K3Q96PC2 410 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 CRB3Q9BUF7 120 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 ACPTQ9BZG2 426 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 TGIF2Q9GZN2 237 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 WDR41Q9HAD4 459 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 LYRM4Q9HD34 91 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 SEMA3GQ9NS98 782 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 FARSBQ9NSD9 589 aaKnown RBP9.53□□□□□ -0.88
USP3-216ENST00000559873 CTSFQ9UBX1 484 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 C19orf25Q9UFG5 118 aaPredicted RBP9.53□□□□□ -0.88
USP3-216ENST00000559873 HAO1Q9UJM8 370 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 TCFL5Q9UL49 500 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 TMED5Q9Y3A6 229 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 DNAJC15Q9Y5T4 150 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 ASPMQ8IZT6 3477 aa9.53□□□□□ -0.88
USP3-216ENST00000559873 GNG14A0A1W2PPG7 69 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 VSTM2BA6NLU5 285 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 TRPC5OSA6NMA1 111 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 TMEM233B4DJY2 109 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 C4orf51C9J302 202 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 RTCAO00442 366 aaKnown RBP9.52□□□□□ -0.89
USP3-216ENST00000559873 CLDN4O14493 209 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.89
USP3-216ENST00000559873 PIP5K1BO14986 540 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 CHST10O43529 356 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 ITM2AO43736 263 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 SKAP2O75563 359 aaPredicted RBP9.52□□□□□ -0.89
USP3-216ENST00000559873 CAPNS1P04632 268 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 HEXBP07686 556 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 ZGLP1P0C6A0 271 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 CPN2P22792 545 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 SERPINB3P29508 390 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 PPP2R1BP30154 601 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 TLX1P31314 330 aaPredicted RBP9.52□□□□□ -0.89
USP3-216ENST00000559873 ARRB2P32121 409 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 BSGP35613 385 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 MAPK12P53778 367 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 OLR1P78380 273 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 HMGCS1Q01581 520 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 TLE3Q04726 772 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 TUBB8Q3ZCM7 444 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 ATP6AP1LQ52LC2 224 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 CCNYL2Q5T2Q4 361 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 RGS9BPQ6ZS82 235 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 COMMD6Q7Z4G1 85 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 ZC3H7AQ8IWR0 971 aaKnown RBP9.52□□□□□ -0.89
USP3-216ENST00000559873 ZNF595Q8IYB9 648 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 RNF175Q8N4F7 328 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 DTWD1Q8N5C7 304 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 C1orf52Q8N6N3 182 aaKnown RBP9.52□□□□□ -0.89
USP3-216ENST00000559873 EFCAB3Q8N7B9 438 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 OR5T3Q8NGG3 340 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 PIWIL2Q8TC59 973 aaKnown RBP9.52□□□□□ -0.89
USP3-216ENST00000559873 CKAP2Q8WWK9 683 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 METTL21AQ8WXB1 218 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 ZNF75CPQ92670 426 aaPredicted RBP9.52□□□□□ -0.89
USP3-216ENST00000559873 NACC2Q96BF6 587 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 C19orf60Q96EN9 201 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 PEX11GQ96HA9 241 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 C7orf26Q96N11 449 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 SORT1Q99523 831 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 SPSB2Q99619 263 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 FAIM2Q9BWQ8 316 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 MRPL1Q9BYD6 325 aaKnown RBP9.52□□□□□ -0.89
USP3-216ENST00000559873 AICDAQ9GZX7 198 aa9.52□□□□□ -0.89
USP3-216ENST00000559873 SOX17Q9H6I2 414 aaPredicted RBP9.52□□□□□ -0.89
USP3-216ENST00000559873 DDX31Q9H8H2 851 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms