RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 MTBPQ96DY7 904 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 C19orf60Q96EN9 201 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 MTERF1Q99551 399 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 MRPL57Q9BQC6 102 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 ILKAPQ9H0C8 392 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 MRPL46Q9H2W6 279 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 COPS7BQ9H9Q2 264 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 ZBTB26Q9HCK0 441 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 SEMA4BQ9NPR2 832 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 PCTPQ9UKL6 214 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 B3GNT3Q9Y2A9 372 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 SHANK1Q9Y566 2161 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 TNPO3Q9Y5L0 923 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 TGFBR3LH3BV60 316 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 PPP6CO00743 305 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 PCDH17O14917 1159 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 PPP2R1BP30154 601 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 SOX11P35716 441 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 MTTPP55157 894 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 CDH13P55290 713 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 LIM2P55344 173 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 RAB38P57729 211 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 RPS13P62277 151 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 PCDH1Q08174 1060 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 MFAP5Q13361 173 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 INPP5JQ15735 1006 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 CRB2Q5IJ48 1285 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 IGFL2Q6UWQ7 119 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 HPS6Q86YV9 775 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 KIF2BQ8N4N8 673 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 EIF1ADQ8N9N8 165 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 OR2W6PQ8NHA6 318 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 DNAJB14Q8TBM8 379 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 CPT1CQ8TCG5 803 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 TM9SF4Q92544 642 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 MIB2Q96AX9 1013 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 SEC16BQ96JE7 1060 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 SERINC2Q96SA4 455 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 EPS8L2Q9H6S3 715 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 DMRT3Q9NQL9 472 aa13.93□□□□□ -0.18
RABGGTA-211ENST00000559850 STX16-NPEPL1H3BU86 382 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 STX16O14662 325 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 MAN1A2O60476 641 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 KLHL41O60662 606 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 SLU7O95391 586 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 CLDN9O95484 217 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 ETHE1O95571 254 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 CYC1P08574 325 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 RPS17P08708 135 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 HSD17B3P37058 310 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 CCNG1P51959 295 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 KCNC4Q03721 635 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 TRAF3Q13114 568 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 ZRSR2Q15696 482 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 KHDRBS2Q5VWX1 349 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 LIPJQ5W064 366 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 QSOX2Q6ZRP7 698 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 Q6ZS92 163 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 CISD2Q8N5K1 135 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 ACOT4Q8N9L9 421 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 ZNF483Q8TF39 744 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 CMTM7Q96FZ5 175 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 KCNC2Q96PR1 638 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 LPAR4Q99677 370 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 MAPKAP1Q9BPZ7 522 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 CCDC77Q9BR77 488 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 NPLQ9BXD5 320 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 CLK4Q9HAZ1 481 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 KCNK13Q9HB14 408 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 PRDM9Q9NQV7 894 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 PRTFDC1Q9NRG1 225 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 FETUBQ9UGM5 382 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 FBXW2Q9UKT8 454 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 TMCO1Q9UM00 188 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 NTNG1Q9Y2I2 539 aa13.92□□□□□ -0.18
RABGGTA-211ENST00000559850 A0A088AWK7 358 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 IGKV3D-11A0A0A0MRZ8 115 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 TCRBV16S1A1N1A0A5B0 115 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 ESPNB1AK53 854 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 DLX3O60479 287 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 ZNF10P21506 573 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 ATP5A1P25705 553 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 SSR2P43308 183 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 UQCRFS1P47985 274 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 RAP1GDS1P52306 607 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 SLC26A5P58743 744 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 ARG2P78540 354 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 ID2Q02363 134 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 ZNF33BQ06732 778 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 TGM3Q08188 693 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 SLC13A2Q13183 592 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 SGO1Q5FBB7 561 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 DEPDC1Q5TB30 811 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 PLAG1Q6DJT9 500 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 RIPOR1Q6ZS17 1223 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 CRLF3Q8IUI8 442 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 L3MBTL4Q8NA19 623 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 OR4F6Q8NGB9 312 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 WDR20Q8TBZ3 569 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 PPP4R1Q8TF05 950 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms