RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 FAM133AQ8N9E0 248 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 BANPQ8N9N5 519 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 LEMD2Q8NC56 503 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 FAM71CQ8NEG0 241 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 OR56B1Q8NGI3 324 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 OR52M1Q8NGK5 317 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 OR5M8Q8NGP6 311 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 DHX58Q96C10 678 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 TUBGCP3Q96CW5 907 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 NECTIN4Q96NY8 510 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 GPA33Q99795 319 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 SLA2Q9H6Q3 261 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 TM9SF3Q9HD45 589 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 Q9N2K0 584 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 GSN-AS1Q9NRJ2 163 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 PIGVQ9NUD9 493 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 OSER1Q9NX31 292 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 PAK5Q9P286 719 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 PFASO15067 1338 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 TMEM129A0AVI4 362 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 TRIM49BA6NDI0 452 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 ZSCAN5CA6NGD5 496 aaPredicted RBP3.26□□□□□ -1.89
SPG11-218ENST00000559754 ANKDD1BA6NHY2 528 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 TMEM110-MUSTN1A8MSY1 372 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 TMEM150CB9EJG8 249 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 SLC28A1O00337 649 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 SORBS2O94875 1100 aaKnown RBP3.26□□□□□ -1.89
SPG11-218ENST00000559754 OR6A2O95222 327 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 NGFP01138 241 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 PCCBP05166 539 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 CPA3P15088 417 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 CEBPBP17676 345 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 PSMA5P28066 241 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 PKLRP30613 574 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 OR3A1P47881 315 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 MTTPP55157 894 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 HUNKP57058 714 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 SSTP61278 116 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 LMO4P61968 165 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 ABRQ12979 859 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 LCP2Q13094 533 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 VEZF1Q14119 521 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 TAF13Q15543 124 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 MCMDC2Q4G0Z9 681 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 FAM46CQ5VWP2 391 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 PWWP2BQ6NUJ5 590 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 C11orf63Q6NUN7 778 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 BHLHB9Q6PI77 547 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 CD164L2Q6UWJ8 174 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 ZNF554Q86TJ5 538 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 VASH2Q86V25 355 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 COMMD2Q86X83 199 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 CRYBG2Q8N1P7 616 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 DNAJC22Q8N4W6 341 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 BMPERQ8N8U9 685 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 U2AF1L4Q8WU68 220 aaKnown RBP3.26□□□□□ -1.89
SPG11-218ENST00000559754 FAM46BQ96A09 425 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 ESAMQ96AP7 390 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 CCDC51Q96ER9 411 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 NSL1Q96IY1 281 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 SGK494Q96LW2 274 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 PCDHB18PQ96TA0 734 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 DCTN5Q9BTE1 182 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 CDK19Q9BWU1 502 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 SLC2A11Q9BYW1 496 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 PITPNM3Q9BZ71 974 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 RMND5AQ9H871 391 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 MRPL17Q9NRX2 175 aaKnown RBP3.26□□□□□ -1.89
SPG11-218ENST00000559754 HOMER3Q9NSC5 361 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 PLCXD1Q9NUJ7 323 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 MIS18AQ9NYP9 233 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 CNOT2Q9NZN8 540 aaKnown RBP3.26□□□□□ -1.89
SPG11-218ENST00000559754 SNX6Q9UNH7 406 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 SMC3Q9UQE7 1217 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 MRPS7Q9Y2R9 242 aaKnown RBP3.26□□□□□ -1.89
SPG11-218ENST00000559754 ASB3Q9Y575 518 aa3.26□□□□□ -1.89
SPG11-218ENST00000559754 IGLV7-46A0A075B6I9 117 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 IGLV9-49A0A0B4J1Y8 123 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 MAGEB16A2A368 324 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 CASTOR2A6NHX0 329 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 CXCL11O14625 94 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 MAGEB3O15480 346 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 KLHL41O60662 606 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 CYTIPO60759 359 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 RPS6KA5O75582 802 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 RHOBTB1O94844 696 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 PRAMEF12O95522 483 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 WDPCPO95876 746 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 RAF1P04049 648 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 TRIM49P0CI25 452 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 TRIM49CP0CI26 452 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 SMIM18P0DKX4 95 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 HAPLN1P10915 354 aaPredicted RBP3.25□□□□□ -1.89
SPG11-218ENST00000559754 IRF2P14316 349 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 HNRNPA2B1P22626 353 aaKnown RBP3.25□□□□□ -1.89
SPG11-218ENST00000559754 OTX2P32243 289 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 NSFP46459 744 aaKnown RBP3.25□□□□□ -1.89
SPG11-218ENST00000559754 TRPC1P48995 793 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 SPIBQ01892 262 aa3.25□□□□□ -1.89
SPG11-218ENST00000559754 IL10RBQ08334 325 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms