RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 ZNF10P21506 573 aaPredicted RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 GNLYP22749 145 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 PPP2R1BP30154 601 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 ARL1P40616 181 aaPredicted RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 MTTPP55157 894 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 LIM2P55344 173 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 SLC26A5P58743 744 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 ARG2P78540 354 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 ZNF33BQ06732 778 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 TGM3Q08188 693 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 ZNF169Q14929 603 aaPredicted RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 CPSF6Q16630 551 aaKnown RBP eCLIP12.1□□□□□ -0.47
BMP4-208ENST00000559642 FAM219BQ5XKK7 198 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 CLNKQ7Z7G1 428 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 KIF2BQ8N4N8 673 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 OR52B6Q8NGF0 335 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 HUS1BQ8NHY5 278 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 SNRNP40Q96DI7 357 aaKnown RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 KCNC2Q96PR1 638 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 LMF1Q96S06 567 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 SERINC2Q96SA4 455 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 MTERF1Q99551 399 aaKnown RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 LPAR4Q99677 370 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 NPLQ9BXD5 320 aaPredicted RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 MRPL46Q9H2W6 279 aaKnown RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 OR51B5Q9H339 312 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 NOL11Q9H8H0 719 aaKnown RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 IPPKQ9H8X2 491 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 CLK4Q9HAZ1 481 aaKnown RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 KCNK13Q9HB14 408 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 DMRT3Q9NQL9 472 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 PRDM9Q9NQV7 894 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 PRDM7Q9NQW5 492 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 ASF1BQ9NVP2 202 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 PSMC3IPQ9P2W1 217 aaPredicted RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 TBK1Q9UHD2 729 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 PCTPQ9UKL6 214 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 RNF11Q9Y3C5 154 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 TNPO3Q9Y5L0 923 aaKnown RBP12.1□□□□□ -0.47
BMP4-208ENST00000559642 TCRBV16S1A1N1A0A5B0 115 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 A8MT66 165 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 FOXO6A8MYZ6 492 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 STX16-NPEPL1H3BU86 382 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 STX16O14662 325 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 MAN1A2O60476 641 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 VPS4BO75351 444 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 WDPCPO95876 746 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 ICAM2P13598 275 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 ATP5A1P25705 553 aaKnown RBP12.09□□□□□ -0.47
BMP4-208ENST00000559642 TNFRSF8P28908 595 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 SERPINB1P30740 379 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 HPDP32754 393 aaPredicted RBP12.09□□□□□ -0.47
BMP4-208ENST00000559642 SSR2P43308 183 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 RPS13P62277 151 aaKnown RBP12.09□□□□□ -0.47
BMP4-208ENST00000559642 AP2B1P63010 937 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 EXT1Q16394 746 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 LGSNQ5TDP6 509 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 ABHD17BQ5VST6 288 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 KHDRBS2Q5VWX1 349 aaKnown RBP12.09□□□□□ -0.47
BMP4-208ENST00000559642 LIPJQ5W064 366 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 TIFABQ6ZNK6 161 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 CRLF3Q8IUI8 442 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 SCUBE1Q8IWY4 988 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 UBLCP1Q8WVY7 318 aaPredicted RBP12.09□□□□□ -0.47
BMP4-208ENST00000559642 MTBPQ96DY7 904 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 CMTM7Q96FZ5 175 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 NPAS2Q99743 824 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 MAPKAP1Q9BPZ7 522 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 MRPL57Q9BQC6 102 aaKnown RBP12.09□□□□□ -0.47
BMP4-208ENST00000559642 ANKZF1Q9H8Y5 726 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 ZBTB26Q9HCK0 441 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 MMP25Q9NPA2 562 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 PRTFDC1Q9NRG1 225 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 TMCO1Q9UM00 188 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 DAPP1Q9UN19 280 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 VPS4AQ9UN37 437 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 MMACHCQ9Y4U1 282 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 CLDN16Q9Y5I7 305 aa12.09□□□□□ -0.47
BMP4-208ENST00000559642 IQANK1A0A1B0GTG1 560 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 MYOCOSA0A1B0GUC4 107 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 DYTNA2CJ06 578 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 SAGE2PA6NJ88 616 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 SMIM23A6NLE4 172 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 RPS17P08708 135 aaKnown RBP12.08□□□□□ -0.48
BMP4-208ENST00000559642 TSPAN8P19075 237 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 TSFMP43897 325 aaKnown RBP12.08□□□□□ -0.48
BMP4-208ENST00000559642 SLCO1A2P46721 670 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 CCNG1P51959 295 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 RAP1GDS1P52306 607 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 TRAF3Q13114 568 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 SLC13A2Q13183 592 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 MRPL49Q13405 166 aaKnown RBP12.08□□□□□ -0.48
BMP4-208ENST00000559642 TLR1Q15399 786 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 ZRSR2Q15696 482 aaKnown RBP12.08□□□□□ -0.48
BMP4-208ENST00000559642 TMEM35AQ53FP2 167 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 BEST3Q8N1M1 668 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 TMEM151AQ8N4L1 468 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 ACOT4Q8N9L9 421 aa12.08□□□□□ -0.48
BMP4-208ENST00000559642 EIF1ADQ8N9N8 165 aaKnown RBP12.08□□□□□ -0.48
BMP4-208ENST00000559642 L3MBTL4Q8NA19 623 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms