RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LOC105369274A0A096LPK9 316 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 LOC102723532A0A0G2JNH3 316 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 H0YGG7 62 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 SERPINB1P30740 379 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 CSTF2P33240 577 aaKnown RBP eCLIP15.73■□□□□ 0.11
TPM1-219ENST00000559397 AHRP35869 848 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 ARF3P61204 181 aaPredicted RBP15.73■□□□□ 0.11
TPM1-219ENST00000559397 PHEXP78562 749 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 TMPRSS12Q86WS5 348 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 OR4N4Q8N0Y3 316 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 TBC1D19Q8N5T2 526 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 C1orf52Q8N6N3 182 aaKnown RBP15.73■□□□□ 0.11
TPM1-219ENST00000559397 ENDOVQ8N8Q3 282 aaKnown RBP15.73■□□□□ 0.11
TPM1-219ENST00000559397 BMPERQ8N8U9 685 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 CREB3L4Q8TEY5 395 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 TESCQ96BS2 214 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 CCDC124Q96CT7 223 aaKnown RBP15.73■□□□□ 0.11
TPM1-219ENST00000559397 TM4SF19Q96DZ7 209 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 TSSK3Q96PN8 268 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 SLC39A3Q9BRY0 314 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 STRADBQ9C0K7 418 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 DCLRE1BQ9H816 532 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 ADA2Q9NZK5 511 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 PACSIN3Q9UKS6 424 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 PLCL2Q9UPR0 1127 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 AP1M2Q9Y6Q5 423 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 H3BMH7 237 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 AGRPO00253 132 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 SRPX2O60687 465 aaPredicted RBP15.72■□□□□ 0.11
TPM1-219ENST00000559397 MYO1DO94832 1006 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 TBX6O95947 436 aaPredicted RBP15.72■□□□□ 0.11
TPM1-219ENST00000559397 SLC6A2P23975 617 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 PTX3P26022 381 aaPredicted RBP15.72■□□□□ 0.11
TPM1-219ENST00000559397 NFYCQ13952 458 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 CCNIQ14094 377 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 GPR19Q15760 415 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 FAM174BQ3ZCQ3 159 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 SPANXN4Q5MJ08 99 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 SAMD4BQ5PRF9 694 aaKnown RBP15.72■□□□□ 0.11
TPM1-219ENST00000559397 SLC2A7Q6PXP3 512 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 DLEU7Q6UYE1 221 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 SLC15A3Q8IY34 581 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 TTLQ8NG68 377 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 CLHC1Q8NHS4 586 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 SLC13A3Q8WWT9 602 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 ZNF501Q96CX3 271 aaPredicted RBP15.72■□□□□ 0.11
TPM1-219ENST00000559397 EGLN2Q96KS0 407 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 CMKLR1Q99788 373 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 ENAMQ9NRM1 1142 aa15.72■□□□□ 0.11
TPM1-219ENST00000559397 A0A1W2PNU3 283 aaPredicted RBP15.71■□□□□ 0.11
TPM1-219ENST00000559397 PRORSD1PA6NEY8 169 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 EFCAB7A8K855 629 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 HYAL3O43820 417 aaPredicted RBP15.71■□□□□ 0.11
TPM1-219ENST00000559397 PGRP06401 933 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 PRPS1L1P21108 318 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 GSTM2P28161 218 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 TIA1P31483 386 aaKnown RBP eCLIP15.71■□□□□ 0.115e-8■□□□□ 8.7
TPM1-219ENST00000559397 SLC7A2P52569 658 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 ACY1Q03154 408 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 TARDBPQ13148 414 aaKnown RBP eCLIP15.71■□□□□ 0.11
TPM1-219ENST00000559397 SPATS1Q496A3 300 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 ASPGQ86U10 573 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 METTL4Q8N3J2 472 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 EBPLQ9BY08 206 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 IL1RL2Q9HB29 575 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 FGF21Q9NSA1 209 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 SUCOQ9UBS9 1254 aaKnown RBP15.71■□□□□ 0.11
TPM1-219ENST00000559397 LOXL2Q9Y4K0 774 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 PCDHA9Q9Y5H5 950 aa15.71■□□□□ 0.11
TPM1-219ENST00000559397 B4E171 279 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 NME4O00746 187 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 ACOT8O14734 319 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 P2RX6O15547 441 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 CLEC3AO75596 197 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 SEMA3DO95025 777 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 PSMG1O95456 288 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 TGFB1P01137 390 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 CCL4P13236 92 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 TSPAN7P41732 249 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 VSX2P58304 361 aaPredicted RBP15.7■□□□□ 0.1
TPM1-219ENST00000559397 CYP4F2P78329 520 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 PHC1P78364 1004 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 HYAL2Q12891 473 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 PWP1Q13610 501 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 CAPRIN1Q14444 709 aaKnown RBP15.7■□□□□ 0.1
TPM1-219ENST00000559397 PUM1Q14671 1186 aaKnown RBP eCLIP15.7■□□□□ 0.15e-9■□□□□ 8.1
TPM1-219ENST00000559397 TMPRSS7Q7RTY8 843 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 TRPV3Q8NET8 790 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 OR1L3Q8NH93 324 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.7■□□□□ 0.11e-6■□□□□ 10.4
TPM1-219ENST00000559397 JADE3Q92613 823 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 GTF2H4Q92759 462 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 RERGQ96A58 199 aaPredicted RBP15.7■□□□□ 0.1
TPM1-219ENST00000559397 TMEM125Q96AQ2 219 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 OR6C1Q96RD1 312 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 MS4A8Q9BY19 250 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 OR51B5Q9H339 312 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 CMTM6Q9NX76 183 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 SLAMF8Q9P0V8 285 aa15.7■□□□□ 0.1
TPM1-219ENST00000559397 NKX1-2Q9UD57 310 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms