RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 OOSP2Q86WS3 158 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 DHFR2Q86XF0 187 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 SYTL1Q8IYJ3 562 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 CFAP206Q8IYR0 622 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 ADGRF3Q8IZF5 1079 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 NXPE1Q8N323 547 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 ACVR1CQ8NER5 493 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 OR52E1Q8NGJ3 308 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 OR8K5Q8NH50 307 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 SSC4DQ8WTU2 575 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 CHPT1Q8WUD6 406 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 TRUB1Q8WWH5 349 aaKnown RBP5.61□□□□□ -1.51
USP3-212ENST00000559276 TSPAN17Q96FV3 270 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 TCTN2Q96GX1 697 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 CENPNQ96H22 339 aaPredicted RBP5.61□□□□□ -1.51
USP3-212ENST00000559276 DNAJC1Q96KC8 554 aaKnown RBP5.61□□□□□ -1.51
USP3-212ENST00000559276 SMAD5Q99717 465 aaKnown RBP5.61□□□□□ -1.51
USP3-212ENST00000559276 C1orf50Q9BV19 199 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 UNKQ9C0B0 810 aaKnown RBP5.61□□□□□ -1.51
USP3-212ENST00000559276 ZCCHC2Q9C0B9 1178 aaKnown RBP5.61□□□□□ -1.51
USP3-212ENST00000559276 KLHL25Q9H0H3 589 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 ASB8Q9H765 288 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 COQ10BQ9H8M1 238 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 FAM60AQ9NP50 221 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 ACSS2Q9NR19 701 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 C1GALT1Q9NS00 363 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 CCM2LQ9NUG4 571 aaPredicted RBP5.61□□□□□ -1.51
USP3-212ENST00000559276 RHBDL2Q9NX52 303 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 ADA2Q9NZK5 511 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 ABCD2Q9UBJ2 740 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 FAM8A1Q9UBU6 413 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 VPS4AQ9UN37 437 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 AAR2Q9Y312 384 aaKnown RBP5.61□□□□□ -1.51
USP3-212ENST00000559276 NDUFAF1Q9Y375 327 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 PKP3Q9Y446 797 aa5.61□□□□□ -1.51
USP3-212ENST00000559276 HIVEP3Q5T1R4 2406 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 C7orf72A4D263 438 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 A6NL46 340 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 UBDO15205 165 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 AKAP10O43572 662 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 NRP2O60462 931 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 ATP6V1G1O75348 118 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 ANXA9O76027 345 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 AGFG2O95081 481 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 LDLRP01130 860 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 NPPAP01160 153 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 CHRNGP07510 517 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 RBP1P09455 135 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 SLC35G4P0C7Q5 338 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 SLC35E2BP0CK96 405 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 CBSLP0DN79 551 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 ATP1B2P14415 290 aaPredicted RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 STMN1P16949 149 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 CDH3P22223 829 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 VAMP1P23763 118 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 FASP25445 335 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 PSMA3P25788 255 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 PSMA4P25789 261 aaKnown RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 COL8A1P27658 744 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 ACADLP28330 430 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 EPHA3P29320 983 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 PEBP1P30086 187 aaKnown RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 AKT1P31749 480 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 CBSP35520 551 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 GRIA1P42261 906 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 PREPP48147 710 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 ERFP50548 548 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 NAGLUP54802 743 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 PKNOX1P55347 436 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 EPS8Q12929 822 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 RAPSNQ13702 412 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 BOP1Q14137 746 aaKnown RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 FASTKQ14296 549 aaKnown RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 USP10Q14694 798 aaKnown RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 NCF4Q15080 339 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 FAM83EQ2M2I3 478 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 FHL5Q5TD97 284 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 IL23RQ5VWK5 629 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 REP15Q6BDI9 236 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 ZNF787Q6DD87 383 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 TTC33Q6PID6 262 aaPredicted RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 SNX20Q7Z614 316 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 CMC1Q7Z7K0 106 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 PIANPQ8IYJ0 282 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 PLD6Q8N2A8 252 aaKnown RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 GALNT4Q8N4A0 578 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 TMEM151AQ8N4L1 468 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 CLDN19Q8N6F1 224 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 DNAAF3Q8N9W5 541 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 PAPD5Q8NDF8 572 aaKnown RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 CALML6Q8TD86 181 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 RAB2BQ8WUD1 216 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 LPGAT1Q92604 370 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 ATP6V1E2Q96A05 226 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 SNRNP40Q96DI7 357 aaKnown RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 CLIP3Q96DZ5 547 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 THAP11Q96EK4 314 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 OR2A14Q96R47 310 aa5.6□□□□□ -1.51
USP3-212ENST00000559276 BARD1Q99728 777 aaKnown RBP5.6□□□□□ -1.51
USP3-212ENST00000559276 CCM2Q9BSQ5 444 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms