RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 C5AR2Q9P296 337 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 C19orf25Q9UFG5 118 aaPredicted RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 TBK1Q9UHD2 729 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 ZNF490Q9ULM2 529 aaPredicted RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 B3GNT3Q9Y2A9 372 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 PCDHGB7Q9Y5F8 929 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 RELNP78509 3460 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 FLNCQ14315 2725 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 FAM181BA6NEQ2 426 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 SYCE1LA8MT33 242 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 FOXO6A8MYZ6 492 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 GOLGA8RI6L899 631 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 K7EPI3 171 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 PRMT3O60678 531 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 SORBS2O94875 1100 aaKnown RBP11.29□□□□□ -0.6
TPM1-216ENST00000558910 KLHL2O95198 593 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 SERPINA7P05543 415 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 SERPINA6P08185 405 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 RNH1P13489 461 aaKnown RBP11.29□□□□□ -0.6
TPM1-216ENST00000558910 EPB42P16452 691 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 TSPAN8P19075 237 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 EEF1DP29692 281 aaKnown RBP11.29□□□□□ -0.6
TPM1-216ENST00000558910 GGT5P36269 586 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 RHAGQ02094 409 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 ID2Q02363 134 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 RUNX2Q13950 521 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 ACAP2Q15057 778 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 EIF2S3LQ2VIR3 472 aaKnown RBP11.29□□□□□ -0.6
TPM1-216ENST00000558910 PAGE2BQ5JRK9 111 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 IQCKQ8N0W5 287 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 KIF2BQ8N4N8 673 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 THAP3Q8WTV1 239 aaPredicted RBP11.29□□□□□ -0.6
TPM1-216ENST00000558910 DCAKDQ8WVC6 231 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 ATP6V1E2Q96A05 226 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 GAL3ST3Q96A11 431 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 SNRNP40Q96DI7 357 aaKnown RBP11.29□□□□□ -0.6
TPM1-216ENST00000558910 MS4A6EQ96DS6 147 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 WDR77Q9BQA1 342 aaPredicted RBP11.29□□□□□ -0.6
TPM1-216ENST00000558910 SARGQ9BW04 601 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 FAM129AQ9BZQ8 928 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 TSPYL1Q9H0U9 437 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 OR51B5Q9H339 312 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 ACTR8Q9H981 624 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 NECTIN3Q9NQS3 549 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 GPRC5BQ9NZH0 403 aa11.29□□□□□ -0.6
TPM1-216ENST00000558910 DOCK10Q96BY6 2186 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 ARHGAP10A1A4S6 786 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 LRIT2A6NDA9 550 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 B3GALT2O43825 422 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 KLHL41O60662 606 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 KRT38O76015 456 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 WDPCPO95876 746 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 MTHFD2P13995 350 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 JAK1P23458 1154 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 PPP2R1BP30154 601 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 SERPINB9P50453 376 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 HNRNPFP52597 415 aaKnown RBP11.28□□□□□ -0.6
TPM1-216ENST00000558910 SKP1P63208 163 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 MFAP5Q13361 173 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 CPSF6Q16630 551 aaKnown RBP eCLIP11.28□□□□□ -0.6
TPM1-216ENST00000558910 SGO1Q5FBB7 561 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 ABHD17BQ5VST6 288 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 MED27Q6P2C8 311 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 TRIM40Q6P9F5 258 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 GOLGA7Q7Z5G4 137 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 PLPP7Q8NBV4 271 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 TMEM52Q8NDY8 209 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 TTLQ8NG68 377 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 DOK4Q8TEW6 326 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 UBLCP1Q8WVY7 318 aaPredicted RBP11.28□□□□□ -0.6
TPM1-216ENST00000558910 NACC2Q96BF6 587 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 NSUN5Q96P11 429 aaKnown RBP11.28□□□□□ -0.6
TPM1-216ENST00000558910 GPR78Q96P69 363 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 CSF3RQ99062 836 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 MTERF1Q99551 399 aaKnown RBP11.28□□□□□ -0.6
TPM1-216ENST00000558910 TUBB6Q9BUF5 446 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 EFCAB11Q9BUY7 163 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 XPR1Q9UBH6 696 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 FBXW2Q9UKT8 454 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 NTNG1Q9Y2I2 539 aa11.28□□□□□ -0.6
TPM1-216ENST00000558910 COPG1Q9Y678 874 aaKnown RBP11.28□□□□□ -0.6
TPM1-216ENST00000558910 UBR5O95071 2799 aaPredicted RBP11.28□□□□□ -0.6
TPM1-216ENST00000558910 LOC102723996A0A087X1L8 192 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 DYTNA2CJ06 578 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 RIPK2O43353 540 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 SMIM24O75264 130 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 SNRPAP09012 282 aaKnown RBP11.27□□□□□ -0.61
TPM1-216ENST00000558910 SMIM10L1P0DMW3 83 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 MYBL2P10244 700 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 SOX11P35716 441 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 SLCO1A2P46721 670 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 NEK2P51955 445 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 RAP1GDS1P52306 607 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 SOX8P57073 446 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 SLC13A2Q13183 592 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 LAPTM5Q13571 262 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 GTF2H2Q13888 395 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 SLC29A2Q14542 456 aa11.27□□□□□ -0.61
TPM1-216ENST00000558910 ZNF169Q14929 603 aaPredicted RBP11.27□□□□□ -0.61
TPM1-216ENST00000558910 SETDB1Q15047 1291 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms