RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 NSMCE2Q96MF7 247 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 RUNDC3BQ96NL0 473 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 NECTIN4Q96NY8 510 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 S1PR3Q99500 378 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 S100A14Q9HCY8 104 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 HOMER3Q9NSC5 361 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 PIGVQ9NUD9 493 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 ZNF319Q9P2F9 582 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 LNPEPQ9UIQ6 1025 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 SH3GLB1Q9Y371 365 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 ETV7Q9Y603 341 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 DHX29Q7Z478 1369 aaKnown RBP3.86□□□□□ -1.79
CASC4-206ENST00000558847 GREB1LQ9C091 1923 aaPredicted RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 SCN5AQ14524 2016 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 SERINC4A6NH21 518 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 MTRF1O75570 445 aaKnown RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 NXPH2O95156 264 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 OR6A2O95222 327 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 FGF19O95750 216 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 UMODP07911 640 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 MYOGP15173 224 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 GNB3P16520 340 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 UGT1A6P19224 532 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 C4BPBP20851 252 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 MAP2K2P36507 400 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 LEPRP48357 1165 aaKnown RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 CLK1P49759 484 aaKnown RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 YBEYP58557 167 aaPredicted RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 IL1RL1Q01638 556 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 HSPA14Q0VDF9 509 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 DRP2Q13474 957 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 TRA2AQ13595 282 aaKnown RBP eCLIP3.85□□□□□ -1.79
CASC4-206ENST00000558847 KRT31Q15323 416 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 SPHARQ15513 63 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 LYPLAL1Q5VWZ2 237 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 FAM53AQ6NSI3 398 aaPredicted RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 OLFM4Q6UX06 510 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 DLEU7Q6UYE1 221 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 RBM43Q6ZSC3 357 aaKnown RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 BTN2A1Q7KYR7 527 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 ADCK1Q86TW2 530 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 STHQ8IWL8 128 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 SLC22A15Q8IZD6 547 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 TRPV3Q8NET8 790 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 NEK11Q8NG66 645 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 SAP25Q8TEE9 199 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 TMEM186Q96B77 213 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 DTD2Q96FN9 168 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 GMPPAQ96IJ6 420 aaPredicted RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 NEDD4LQ96PU5 975 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 SSX3Q99909 188 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 SPAG8Q99932 426 aaPredicted RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 NUSAP1Q9BXS6 441 aaKnown RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 ATG10Q9H0Y0 220 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 GANQ9H2C0 597 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 GPN1Q9HCN4 374 aaPredicted RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 PLEK2Q9NYT0 353 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 FETUBQ9UGM5 382 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 POMT2Q9UKY4 750 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 PIN4Q9Y237 131 aaKnown RBP3.85□□□□□ -1.79
CASC4-206ENST00000558847 SMCHD1A6NHR9 2005 aa3.85□□□□□ -1.79
CASC4-206ENST00000558847 A0A087WYN8 130 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 ATP6AP2A0A1C7CYW4 349 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 EEF2KO00418 725 aaKnown RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 RASGRF2O14827 1237 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 OGTO15294 1046 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 NME2P1O60361 137 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 GMNNO75496 209 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 EPOP01588 193 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 SLC4A1P02730 911 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 APRTP07741 180 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 PCP11498 1178 aaKnown RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 ODC1P11926 461 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 SKILP12757 684 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 SFNP31947 248 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 FEN1P39748 380 aaKnown RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 CNN1P51911 297 aaKnown RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 HNRNPFP52597 415 aaKnown RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 BPIFB3P59826 476 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 CDKL1Q00532 357 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 MEF2DQ14814 521 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 PDK1Q15118 436 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 MTHFSDQ2M296 383 aaKnown RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 HLA-BQ31612 363 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 RFTN2Q52LD8 501 aaPredicted RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 DDI2Q5TDH0 399 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 MFSD7Q6UXD7 560 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 TAF8Q7Z7C8 310 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 CUZD1Q86UP6 607 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 SLC43A2Q8N370 569 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 OR6M1Q8NGM8 313 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 C8orf46Q8TAG6 207 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 GOLGA5Q8TBA6 731 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 UBTD2Q8WUN7 234 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 PRCCQ92733 491 aaPredicted RBP3.84□□□□□ -1.79
CASC4-206ENST00000558847 GLYATL1Q969I3 302 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 SLC35C1Q96A29 364 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 AZIN2Q96A70 460 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 LRR1Q96L50 414 aa3.84□□□□□ -1.79
CASC4-206ENST00000558847 FAM111AQ96PZ2 611 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms