RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 FGD3Q5JSP0 725 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 ATAT1Q5SQI0 421 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 KHDRBS2Q5VWX1 349 aaKnown RBP10.14□□□□□ -0.79
CUX1-217ENST00000558836 XAF1Q6GPH4 301 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 OLIG3Q7RTU3 272 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 CAMKMTQ7Z624 323 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 PIK3C3Q8NEB9 887 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 SETD7Q8WTS6 366 aaKnown RBP10.14□□□□□ -0.79
CUX1-217ENST00000558836 RAB8BQ92930 207 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 TAMM41Q96BW9 452 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 C7orf34Q96L11 122 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 SH3GL3Q99963 347 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 TEX101Q9BY14 249 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 ZNF717Q9BY31 904 aaPredicted RBP10.14□□□□□ -0.79
CUX1-217ENST00000558836 LHPPQ9H008 270 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 ATAD3AQ9NVI7 634 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 RLIMQ9NVW2 624 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 TEX10Q9NXF1 929 aaPredicted RBP10.14□□□□□ -0.79
CUX1-217ENST00000558836 TAS2R9Q9NYW1 312 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 IGKV1-8A0A0C4DH67 115 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 KMOO15229 486 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 TMPRSS11DO60235 418 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 SEMG1P04279 462 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 CD247P20963 164 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 DNAJA1P31689 397 aaKnown RBP10.14□□□□□ -0.79
CUX1-217ENST00000558836 PIK3CBP42338 1070 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 KIR2DL1P43626 348 aaPredicted RBP10.14□□□□□ -0.79
CUX1-217ENST00000558836 RAD23AP54725 363 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 TFF2Q03403 129 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 VEZF1Q14119 521 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 GANABQ14697 944 aaKnown RBP10.14□□□□□ -0.79
CUX1-217ENST00000558836 MYBPC3Q14896 1274 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 IQCCQ4KMZ1 466 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 TMEM196Q5HYL7 178 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 DEPDC1Q5TB30 811 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 GPR153Q6NV75 609 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 ANKRD54Q6NXT1 300 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 ZNF773Q6PK81 442 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 TP53I13Q8NBR0 393 aaPredicted RBP10.14□□□□□ -0.79
CUX1-217ENST00000558836 ADAMTS16Q8TE57 1224 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 METTL2AQ96IZ6 378 aaKnown RBP10.14□□□□□ -0.79
CUX1-217ENST00000558836 MAGED4Q96JG8 741 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 C17orf62Q9BQA9 187 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 SLC17A9Q9BYT1 436 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 KLHL31Q9H511 634 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 ADPRHL2Q9NX46 363 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 RAB23Q9ULC3 237 aa10.14□□□□□ -0.79
CUX1-217ENST00000558836 POM121BA6NF01 834 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 H3BMQ9 156 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 TPD52L2O43399 206 aaKnown RBP10.13□□□□□ -0.79
CUX1-217ENST00000558836 SH3BP5O60239 455 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 TNFRSF21O75509 655 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 CEACAM5P06731 702 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 IL1RNP18510 177 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 COL9A1P20849 921 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 C5AR1P21730 350 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 CCR8P51685 355 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 MANFP55145 182 aaKnown RBP10.13□□□□□ -0.79
CUX1-217ENST00000558836 PPP2CBP62714 309 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 PPP2CAP67775 309 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 CDK5R2Q13319 367 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 ZNF691Q5VV52 312 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 DGLUCYQ7Z3D6 616 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 SPARTQ8N0X7 666 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 TM4SF18Q96CE8 201 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 COG8Q96MW5 612 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 KCNC2Q96PR1 638 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 AIF1LQ9BQI0 150 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 DOHHQ9BU89 302 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 MYNNQ9NPC7 610 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 LHX9Q9NQ69 397 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 C1GALT1Q9NS00 363 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 KRT84Q9NSB2 600 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 ETAA1Q9NY74 926 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 NDUFAF4Q9P032 175 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 SCHIP1Q9P0W5 487 aaPredicted RBP10.13□□□□□ -0.79
CUX1-217ENST00000558836 MDC1Q14676 2089 aaKnown RBP10.13□□□□□ -0.79
CUX1-217ENST00000558836 ARHGEF17Q96PE2 2063 aaPredicted RBP10.13□□□□□ -0.79
CUX1-217ENST00000558836 SLC1A7O00341 560 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 NARSO43776 548 aaKnown RBP10.13□□□□□ -0.79
CUX1-217ENST00000558836 NME6O75414 186 aaPredicted RBP10.13□□□□□ -0.79
CUX1-217ENST00000558836 CDK4P11802 303 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 BSGP35613 385 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 TRIM23P36406 574 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 CDH12P55289 794 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 SELENOWP63302 87 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 PDE7AQ13946 482 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 GCNT6Q5T4J0 391 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 BROXQ5VW32 411 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 KDM4DQ6B0I6 523 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 TTC29Q8NA56 475 aaPredicted RBP10.13□□□□□ -0.79
CUX1-217ENST00000558836 TMEM145Q8NBT3 493 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 SMPDL3AQ92484 453 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 FAM210AQ96ND0 272 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 FCRL4Q96PJ5 515 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 SYNPO2LQ9H987 977 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 AMBNQ9NP70 447 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 OBP2AQ9NY56 170 aa10.13□□□□□ -0.79
CUX1-217ENST00000558836 WARS2Q9UGM6 360 aaKnown RBP10.13□□□□□ -0.79
CUX1-217ENST00000558836 GMPPBQ9Y5P6 360 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms