RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 UBE2E3Q969T4 207 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 WDR34Q96EX3 536 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 SMIM10Q96HG1 83 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 LPAR4Q99677 370 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 MACROD1Q9BQ69 325 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 EFCAB11Q9BUY7 163 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 SLC6A16Q9GZN6 736 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 VN1R1Q9GZP7 353 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 CDC42EP4Q9H3Q1 356 aaKnown RBP14.34□□□□□ -0.11
RPL28-206ENST00000558752 ALG9Q9H6U8 611 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 ZNF180Q9UJW8 692 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 ITGB1BP2Q9UKP3 347 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 NAALAD2Q9Y3Q0 740 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 F8P00451 2351 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 NF1P21359 2839 aa14.34□□□□□ -0.11
RPL28-206ENST00000558752 A0A088AWK7 358 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 ANKDD1BA6NHY2 528 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 CLEC3AO75596 197 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 KLHL2O95198 593 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 ABOP16442 354 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 IL1RNP18510 177 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 ZNF10P21506 573 aaPredicted RBP14.33□□□□□ -0.12
RPL28-206ENST00000558752 JAK1P23458 1154 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 MSH2P43246 934 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 XCR1P46094 333 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 KCNC1P48547 511 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 HSPA7P48741 367 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 SERPINB8P50452 374 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 MAT1AQ00266 395 aaKnown RBP14.33□□□□□ -0.12
RPL28-206ENST00000558752 OR1C1Q15619 314 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 PDK4Q16654 411 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 Q6ZPB1 254 aaPredicted RBP14.33□□□□□ -0.12
RPL28-206ENST00000558752 TRMT10CQ7L0Y3 403 aaKnown RBP14.33□□□□□ -0.12
RPL28-206ENST00000558752 LRRC70Q7Z2Q7 622 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 CMC1Q7Z7K0 106 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 LGI4Q8N135 537 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 BEST3Q8N1M1 668 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 EIF1ADQ8N9N8 165 aaKnown RBP14.33□□□□□ -0.12
RPL28-206ENST00000558752 ANKRD53Q8N9V6 530 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 UTP15Q8TED0 518 aaKnown RBP14.33□□□□□ -0.12
RPL28-206ENST00000558752 CREB3L4Q8TEY5 395 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 NXNL1Q96CM4 212 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 PTCD3Q96EY7 689 aaKnown RBP14.33□□□□□ -0.12
RPL28-206ENST00000558752 C14orf79Q96F83 325 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 ATOH8Q96SQ7 321 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 MMP25Q9NPA2 562 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 ZNF835Q9Y2P0 537 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 MEMO1Q9Y316 297 aa14.33□□□□□ -0.12
RPL28-206ENST00000558752 A0A087WUV0 522 aaPredicted RBP14.32□□□□□ -0.12
RPL28-206ENST00000558752 A0A096LPK6 155 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 HMX2A2RU54 273 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 ACSL3O95573 720 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 STATHP02808 62 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 COL6A2P12110 1019 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 ADORA2A-AS1P86434 159 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 PMP22Q01453 160 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 OC90Q02509 493 aaPredicted RBP14.32□□□□□ -0.12
RPL28-206ENST00000558752 SRSF11Q05519 484 aaKnown RBP14.32□□□□□ -0.12
RPL28-206ENST00000558752 TUBA3CQ13748 450 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 E2F2Q14209 437 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 UAP1Q16222 522 aaPredicted RBP14.32□□□□□ -0.12
RPL28-206ENST00000558752 TUBA3EQ6PEY2 450 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 PDSS2Q86YH6 399 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 GHDCQ8N2G8 530 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 SNX31Q8N9S9 440 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 ZCCHC10Q8TBK6 192 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 PHF10Q8WUB8 498 aaKnown RBP14.32□□□□□ -0.12
RPL28-206ENST00000558752 TBC1D20Q96BZ9 403 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 SPOCK3Q9BQ16 436 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 TMEM79Q9BSE2 394 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 NPLQ9BXD5 320 aaPredicted RBP14.32□□□□□ -0.12
RPL28-206ENST00000558752 TRIM8Q9BZR9 551 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 RHBGQ9H310 441 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 SNX15Q9NRS6 342 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 TINAGQ9UJW2 476 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 TNPO3Q9Y5L0 923 aaKnown RBP14.32□□□□□ -0.12
RPL28-206ENST00000558752 PCNX1Q96RV3 2341 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 CELSR1Q9NYQ6 3014 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 SCN2AQ99250 2005 aa14.32□□□□□ -0.12
RPL28-206ENST00000558752 HIVEP1P15822 2718 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 ASPDHA6ND91 283 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 LRIT2A6NDA9 550 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 SYNDIG1LA6NDD5 238 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 MAGEB17A8MXT2 336 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 NPIPA5E9PKD4 350 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 K7EPI3 171 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 PRRG2O14669 202 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 CHST10O43529 356 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 CCNT2O60583 730 aaKnown RBP14.31□□□□□ -0.12
RPL28-206ENST00000558752 RDH16O75452 317 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 ABHD2P08910 425 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 RBP1P09455 135 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 ECHS1P30084 290 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 SERPINB1P30740 379 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 CD96P40200 585 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 IRF8Q02556 426 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 TGM3Q08188 693 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 DLG1Q12959 904 aa14.31□□□□□ -0.12
RPL28-206ENST00000558752 SLBPQ14493 270 aaKnown RBP eCLIP14.31□□□□□ -0.12
RPL28-206ENST00000558752 EFTUD2Q15029 972 aaKnown RBP eCLIP14.31□□□□□ -0.124e-6■■■□□ 14.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms