RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 CNOT11Q9UKZ1 510 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 EMCNQ9ULC0 261 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 DNAJC16Q9Y2G8 782 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PLLPQ9Y342 182 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 FIS1Q9Y3D6 152 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 HEMK1Q9Y5R4 338 aaPredicted RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 GMEB1Q9Y692 573 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 POMT1Q9Y6A1 747 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 COMMD3-BMI1R4GMX3 469 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 TDRD6O60522 2096 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 TRAV34A0A0B4J273 112 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 SERTM2A0A1B0GWG4 89 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 E9PBE3 544 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 GFYI3L273 518 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 GTPBP1O00178 669 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 SYT5O00445 386 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 DVL2O14641 736 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PHGDHO43175 533 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 GLRA3O75311 464 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PSIP1O75475 530 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 DCTN3O75935 186 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 DIRAS3O95661 229 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 TNFP01375 233 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 C2P06681 752 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 ERGP11308 486 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 GNSP15586 552 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 HOXB4P17483 251 aaPredicted RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 DGKAP23743 735 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 GCH1P30793 250 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 MAT2AP31153 395 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 FMO4P31512 558 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 CCR7P32248 378 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PTDSS1P48651 473 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PXNP49023 591 aaPredicted RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 KPNA2P52292 529 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 CASP9P55211 416 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 CLDN2P57739 230 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 NAA20P61599 178 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 NR1D2Q14995 579 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 NCF4Q15080 339 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 SHBQ15464 509 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PGS1Q32NB8 556 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PTRHD1Q6GMV3 140 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 BORAQ6PGQ7 559 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 TMEM220Q6QAJ8 160 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 TMEM207Q6UWW9 146 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 NAPRTQ6XQN6 538 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 MAVSQ7Z434 540 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 LDB1Q86U70 411 aaPredicted RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 NRROSQ86YC3 692 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 FAM20CQ8IXL6 584 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 KBTBD2Q8IY47 623 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PHACTR4Q8IZ21 702 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 ALDH16A1Q8IZ83 802 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 CENPLQ8N0S6 344 aaPredicted RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 LSMEM2Q8N112 164 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 TMEM151AQ8N4L1 468 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 RNF148Q8N7C7 305 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 RBM15BQ8NDT2 890 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 UBTD2Q8WUN7 234 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 NCSTNQ92542 709 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 KLK6Q92876 244 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 MCUR1Q96AQ8 359 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 C19orf60Q96EN9 201 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PTCD3Q96EY7 689 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 FER1L6-AS2Q96M78 137 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 C1QTNF3Q9BXJ4 246 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 OR2AG1Q9H205 316 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 NOP53Q9NZM5 478 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 KLQ9UEF7 1012 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 DCDC2Q9UHG0 476 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 RPH3AQ9Y2J0 694 aaPredicted RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PCYT1BQ9Y5K3 369 aaPredicted RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 SLCO1B1Q9Y6L6 691 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 DNAH14Q0VDD8 3507 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 A0A096LPK6 155 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 A0A1B0GTQ1 180 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 OR5K4A6NMS3 321 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 A8MXE2 369 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 H3BM21 787 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 SOCS6O14544 535 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 TM9SF1O15321 606 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 INPP4BO15327 924 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 GSC2O15499 205 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 HNRNPRO43390 633 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 PPM1BO75688 479 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 POP7O75817 140 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 CDK14O94921 469 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 C8GP07360 202 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 CHRNGP07510 517 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 SLC2A4P14672 509 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 CD1DP15813 335 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 VCLP18206 1134 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 NCF2P19878 526 aaPredicted RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 ITPKAP23677 461 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 EEF1DP29692 281 aaKnown RBP3.91□□□□□ -1.78
ZEB1-212ENST00000558655 RGS4P49798 205 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 HK3P52790 923 aa3.91□□□□□ -1.78
ZEB1-212ENST00000558655 THOP1P52888 689 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms