RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 MAP2K3P46734 347 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 FKBP1AP62942 108 aaKnown RBP13.48□□□□□ -0.25
SPG11-210ENST00000558319 DCAF12L1Q5VU92 463 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 AURKBQ96GD4 344 aaPredicted RBP13.48□□□□□ -0.25
SPG11-210ENST00000558319 RAD9AQ99638 391 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 BCO2Q9BYV7 579 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 OR8D2Q9GZM6 311 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 OR10A4Q9H209 315 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 ENY2Q9NPA8 101 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 POU2F3Q9UKI9 436 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 FEZF1A0PJY2 475 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 HSPA12AO43301 675 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 SSX2Q16385 188 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 DUOXA1Q1HG43 343 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 CCBE1Q6UXH8 406 aaPredicted RBP13.48□□□□□ -0.25
SPG11-210ENST00000558319 DEDD2Q8WXF8 326 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 GALPQ9UBC7 116 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 MRPS17Q9Y2R5 130 aaKnown RBP13.48□□□□□ -0.25
SPG11-210ENST00000558319 ZNF705FA8MVS1 300 aaPredicted RBP13.48□□□□□ -0.25
SPG11-210ENST00000558319 SCO2O43819 266 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 CRYZL1O95825 349 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 ZNF705DP0CH99 300 aaPredicted RBP13.48□□□□□ -0.25
SPG11-210ENST00000558319 ZNF705BP0CI00 300 aaPredicted RBP13.48□□□□□ -0.25
SPG11-210ENST00000558319 LSSP48449 732 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 VSX2P58304 361 aaPredicted RBP13.48□□□□□ -0.25
SPG11-210ENST00000558319 ERVK-25P63136 954 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 PRAMEF14Q5SWL7 426 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 GPR157Q5UAW9 335 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 PRAMEF13Q5VWM6 474 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 MBOAT1Q6ZNC8 495 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 FAM217AQ8IXS0 508 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 ACTR3BQ9P1U1 418 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 VPS29Q9UBQ0 182 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 GJD2Q9UKL4 321 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 PCDHGB1Q9Y5G3 927 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 A6NL46 340 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 ARL6IP5O75915 188 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 VNN1O95497 513 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 OXSR1O95747 527 aaPredicted RBP13.47□□□□□ -0.25
SPG11-210ENST00000558319 OGDHQ02218 1023 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 DPY19L3Q6ZPD9 716 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 OR52E4Q8NGH9 312 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 ZDHHC1Q8WTX9 485 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 ASB15Q8WXK1 588 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.47□□□□□ -0.25
SPG11-210ENST00000558319 DERAQ9Y315 318 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 PCDHGB5Q9Y5G0 923 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 RNF13O43567 381 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 LCKP06239 509 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 DYRK1AQ13627 763 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 NFATC4Q14934 902 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 ZNF674Q2M3X9 581 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 SLC30A8Q8IWU4 369 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 BORCS8Q96FH0 119 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 TMEM68Q96MH6 324 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 DTLQ9NZJ0 730 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 DIP2CQ9Y2E4 1556 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 G6PDP11413 515 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 PTGR1Q14914 329 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 TMEM164Q5U3C3 297 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 EPGNQ6UW88 154 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 KIF18BQ86Y91 864 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 SCML4Q8N228 414 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 LIN37Q96GY3 246 aaPredicted RBP13.47□□□□□ -0.25
SPG11-210ENST00000558319 SLC25A44Q96H78 314 aaPredicted RBP13.47□□□□□ -0.25
SPG11-210ENST00000558319 ZNF317Q96PQ6 595 aaPredicted RBP13.47□□□□□ -0.25
SPG11-210ENST00000558319 HAS3O00219 553 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 SLC19A2O60779 497 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 TYRP14679 529 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 GNAZP19086 355 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 NSG1P42857 185 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 GTF2IRD2BQ6EKJ0 949 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 SLC36A4Q6YBV0 504 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 GTF2IRD2Q86UP8 949 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 METTL25Q8N6Q8 603 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 NAT8LQ8N9F0 302 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 MFSD2AQ8NA29 543 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 OR51G2Q8NGK0 314 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 NEIL3Q8TAT5 605 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 FNDC8Q8TC99 324 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 RAB8BQ92930 207 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 RDH12Q96NR8 316 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 ASF1BQ9NVP2 202 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 SEC14L4Q9UDX3 406 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 LAMP5Q9UJQ1 280 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 ADAMTS6Q9UKP5 1117 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 RNF11Q9Y3C5 154 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 YY2O15391 372 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 PRPS1L1P21108 318 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 EDNRBP24530 442 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 PTGER3P43115 390 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 CLRN1P58418 232 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 ST3GAL4Q11206 333 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 PPP1R3AQ16821 1122 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 CLEC20AQ6ZU45 233 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 CLEC4DQ8WXI8 215 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 TGM7Q96PF1 710 aa13.47□□□□□ -0.25
SPG11-210ENST00000558319 TUBA1CQ9BQE3 449 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms