RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 COPS8Q99627 209 aa4.87□□□□□ -1.63
HMG20A-204ENST00000558288 C16orf70Q9BSU1 422 aa4.87□□□□□ -1.63
HMG20A-204ENST00000558288 FAM126AQ9BYI3 521 aaPredicted RBP4.87□□□□□ -1.63
HMG20A-204ENST00000558288 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMG20A-204ENST00000558288 EVA1BQ9NVM1 165 aa4.87□□□□□ -1.63
HMG20A-204ENST00000558288 OSER1Q9NX31 292 aa4.87□□□□□ -1.63
HMG20A-204ENST00000558288 B3GNT2Q9NY97 397 aa4.87□□□□□ -1.63
HMG20A-204ENST00000558288 DNAJC27Q9NZQ0 273 aa4.87□□□□□ -1.63
HMG20A-204ENST00000558288 SEC14L4Q9UDX3 406 aa4.87□□□□□ -1.63
HMG20A-204ENST00000558288 CLEC2DQ9UHP7 191 aa4.87□□□□□ -1.63
HMG20A-204ENST00000558288 CHD7Q9P2D1 2997 aa4.87□□□□□ -1.63
HMG20A-204ENST00000558288 FNDC1Q4ZHG4 1894 aaPredicted RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 ISM1B1AKI9 464 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 H3BUI4 141 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 PTGESO14684 152 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 PLA2G10O15496 165 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 GPR32O75388 356 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 GJB5O95377 273 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 PDYNP01213 254 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 ANXA8P13928 327 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 CTRB1P17538 263 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 DDCP20711 480 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 LPOP22079 712 aaPredicted RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 CSTF2P33240 577 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 EVI2BP34910 448 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 PBX3P40426 434 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 RGS4P49798 205 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF140P52738 457 aaPredicted RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 CAV3P56539 151 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 CLDN8P56748 225 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 DDX39BQ13838 428 aaKnown RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 C1DQ13901 141 aaKnown RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SUZ12Q15022 739 aaKnown RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 PTGES3Q15185 160 aaKnown RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SPHARQ15513 63 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 DUOXA1Q1HG43 343 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 TIGD3Q6B0B8 471 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 PLAG1Q6DJT9 500 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 CTRB2Q6GPI1 263 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 FAM171BQ6P995 826 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 BBS7Q8IWZ6 715 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 MDGA1Q8NFP4 955 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 PPTC7Q8NI37 304 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 DNAJA4Q8WW22 397 aaPredicted RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 KCNJ9Q92806 393 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 LPPQ93052 612 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 REPS1Q96D71 796 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 C1GALT1C1Q96EU7 318 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 HYLS1Q96M11 299 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 LRFN3Q9BTN0 628 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 CINPQ9BW66 212 aaPredicted RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 ACPTQ9BZG2 426 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 CIPCQ9C0C6 399 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SLC7A5P2Q9GIP4 190 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 HDHD2Q9H0R4 259 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 ANKRA2Q9H9E1 313 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 HHATLQ9HCP6 504 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 ELOVL2Q9NXB9 296 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 TMCC3Q9ULS5 477 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 FZD4Q9ULV1 537 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 STUB1Q9UNE7 303 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 ING4Q9UNL4 249 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 CCL27Q9Y4X3 112 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 PCDHGA2Q9Y5H1 932 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SDK1Q7Z5N4 2213 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 PLXNA1Q9UIW2 1896 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 ABHD14A-ACY1A0A1B0GW23 586 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 FABP7O15540 132 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SLC22A5O76082 557 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 B3GAT3O94766 335 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SCG5P05408 212 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 ADRA2AP08913 450 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SMIM10L2AP0DMW4 78 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SMIM10L2BP0DMW5 78 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 FEN1P39748 380 aaKnown RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 CRATP43155 626 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 AFF1P51825 1210 aaKnown RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 RRAS2P62070 204 aaPredicted RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 IL10RBQ08334 325 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 TAF1AQ15573 450 aaPredicted RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SNAPC1Q16533 368 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 TTLL9Q3SXZ7 439 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 KLHL12Q53G59 568 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 TCEAL5Q5H9L2 206 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 MS4A13Q5J8X5 152 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SBSNQ6UWP8 590 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 LIMS2Q7Z4I7 341 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 KCTD20Q7Z5Y7 419 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 SPATA2LQ8IUW3 424 aaPredicted RBP4.86□□□□□ -1.63
HMG20A-204ENST00000558288 CFAP52Q8N1V2 620 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 OR4M2Q8NGB6 313 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 OR6C4Q8NGE1 309 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 AKAP1Q92667 903 aaKnown RBP eCLIP4.86□□□□□ -1.633e-6■■■■□ 22.6
HMG20A-204ENST00000558288 PEX13Q92968 403 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 IGSF8Q969P0 613 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 QRFPRQ96P65 431 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 FAM129BQ96TA1 746 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 TCF25Q9BQ70 676 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 PAAF1Q9BRP4 392 aa4.86□□□□□ -1.63
HMG20A-204ENST00000558288 WACQ9BTA9 647 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms