RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 DDX31Q9H8H2 851 aaKnown RBP14.45□□□□□ -0.1
NEDD1-213ENST00000557644 NMRK1Q9NWW6 199 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 MAP4K5Q9Y4K4 846 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 HDAC3O15379 428 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 CHST10O43529 356 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 B3GALT2O43825 422 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 EDF1O60869 148 aaKnown RBP14.45□□□□□ -0.1
NEDD1-213ENST00000557644 PEX11AO75192 247 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 JRKO75564 520 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 RSL1D1O76021 490 aaKnown RBP14.45□□□□□ -0.1
NEDD1-213ENST00000557644 TPP2P29144 1249 aaPredicted RBP14.45□□□□□ -0.1
NEDD1-213ENST00000557644 PCBP4P57723 403 aaKnown RBP14.45□□□□□ -0.1
NEDD1-213ENST00000557644 RAE1P78406 368 aaKnown RBP14.45□□□□□ -0.1
NEDD1-213ENST00000557644 SLAMF1Q13291 335 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 MAP7Q14244 749 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 ERV3-1Q14264 604 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 RFTN2Q52LD8 501 aaPredicted RBP14.45□□□□□ -0.1
NEDD1-213ENST00000557644 SHISA6Q6ZSJ9 500 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 PRSS58Q8IYP2 241 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 CA13Q8N1Q1 262 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 C11orf24Q96F05 449 aaPredicted RBP14.45□□□□□ -0.1
NEDD1-213ENST00000557644 PEX11GQ96HA9 241 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 SERINC2Q96SA4 455 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 EBPLQ9BY08 206 aa14.45□□□□□ -0.1
NEDD1-213ENST00000557644 A0A088AWK7 358 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 A0A0A6YYD5 115 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 OR2W5A6NFC9 320 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 ZNF195O14628 629 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 SEC22BO75396 215 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 SCELO95171 688 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 ONECUT2O95948 504 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 ZNF10P21506 573 aaPredicted RBP14.44□□□□□ -0.1
NEDD1-213ENST00000557644 XCR1P46094 333 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 HK2P52789 917 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 ACSM2AQ08AH3 577 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 CLN3Q13286 438 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 KIAA0040Q15053 153 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 ACSM2BQ68CK6 577 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 OVCH1Q7RTY7 1134 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 VASH2Q86V25 355 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 NUDT13Q86X67 352 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 TUBGCP3Q96CW5 907 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 MAPKAP1Q9BPZ7 522 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 WDR55Q9H6Y2 383 aaPredicted RBP14.44□□□□□ -0.1
NEDD1-213ENST00000557644 LRTM1Q9HBL6 345 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 FGFR1OP2Q9NVK5 253 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 AHSPQ9NZD4 102 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 POLR3HQ9Y535 204 aaPredicted RBP14.44□□□□□ -0.1
NEDD1-213ENST00000557644 LOC400499M0QZD8 3231 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 FAM227AF5H4B4 570 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 CDC123O75794 336 aaPredicted RBP14.44□□□□□ -0.1
NEDD1-213ENST00000557644 VIMP08670 466 aaKnown RBP14.44□□□□□ -0.1
NEDD1-213ENST00000557644 DLSTP36957 453 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 TSFMP43897 325 aaKnown RBP14.44□□□□□ -0.1
NEDD1-213ENST00000557644 LIM2P55344 173 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 RPS18P62269 152 aaKnown RBP14.44□□□□□ -0.1
NEDD1-213ENST00000557644 SKP1P63208 163 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 NCF4Q15080 339 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 SPIN4Q56A73 249 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 MRPL14Q6P1L8 145 aaKnown RBP14.44□□□□□ -0.1
NEDD1-213ENST00000557644 KIRREL3Q8IZU9 778 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 CSF3RQ99062 836 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 AKTIPQ9H8T0 292 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 MEAF6Q9HAF1 191 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 C1orf109Q9NX04 203 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 KCMF1Q9P0J7 381 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 DKK4Q9UBT3 224 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 FBXW2Q9UKT8 454 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 DAPP1Q9UN19 280 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 USH1CQ9Y6N9 552 aa14.44□□□□□ -0.1
NEDD1-213ENST00000557644 GOLGA8QA0A0J9YX86 632 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 GOLGA8OA6NCC3 632 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 GOLGA8NF8WBI6 632 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 TERTO14746 1132 aaKnown RBP14.43□□□□□ -0.1
NEDD1-213ENST00000557644 PRPH2P23942 346 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 EPHA3P29320 983 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 ARFIP1P53367 373 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 HNRNPH2P55795 449 aaKnown RBP14.43□□□□□ -0.1
NEDD1-213ENST00000557644 RPL38P63173 70 aaKnown RBP14.43□□□□□ -0.1
NEDD1-213ENST00000557644 NKG7Q16617 165 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 SLC9B1Q4ZJI4 515 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 CCNYL2Q5T2Q4 361 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 UNQ6494/PRO21346Q6UXR6 183 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 LAPTM4BQ86VI4 370 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 LRRC34Q8IZ02 419 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 ZCCHC7Q8N3Z6 543 aaKnown RBP14.43□□□□□ -0.1
NEDD1-213ENST00000557644 ENDOVQ8N8Q3 282 aaKnown RBP14.43□□□□□ -0.1
NEDD1-213ENST00000557644 STT3BQ8TCJ2 826 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 CCT7Q99832 543 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 ROGDIQ9GZN7 287 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 SOX17Q9H6I2 414 aaPredicted RBP14.43□□□□□ -0.1
NEDD1-213ENST00000557644 ZNF282Q9UDV7 671 aaPredicted RBP14.43□□□□□ -0.1
NEDD1-213ENST00000557644 VTI1BQ9UEU0 232 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 IL17BQ9UHF5 180 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 ATG4BQ9Y4P1 393 aa14.43□□□□□ -0.1
NEDD1-213ENST00000557644 MRPS18BQ9Y676 258 aaKnown RBP14.43□□□□□ -0.1
NEDD1-213ENST00000557644 C9J4A7 227 aa14.42□□□□□ -0.1
NEDD1-213ENST00000557644 SDHDO14521 159 aa14.42□□□□□ -0.1
NEDD1-213ENST00000557644 PCDH7O60245 1069 aa14.42□□□□□ -0.1
NEDD1-213ENST00000557644 PRKRAO75569 313 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms