RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 MTFMTQ96DP5 389 aaKnown RBP9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 PGM2Q96G03 612 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 VPS50Q96JG6 964 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 FER1L6-AS2Q96M78 137 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 QRFPRQ96P65 431 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 SERINC2Q96SA4 455 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 MESP1Q9BRJ9 268 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 TRIM55Q9BYV6 548 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 ROGDIQ9GZN7 287 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 VN1R1Q9GZP7 353 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 ING2Q9H160 280 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 STMN4Q9H169 189 aaPredicted RBP9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 MID1IP1Q9NPA3 183 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 ARGLU1Q9NWB6 273 aaPredicted RBP9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 FBXL4Q9UKA2 621 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 SNX6Q9UNH7 406 aa9.99□□□□□ -0.81
HNRNPC-232ENST00000557442 OR2W5A6NFC9 320 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 FOXE1O00358 373 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 PLPP1O14494 284 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 TYROBPO43914 113 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 B4GALT2O60909 372 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 CYC1P08574 325 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 PTX3P26022 381 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 HMOX2P30519 316 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 EFNA3P52797 238 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 PKNOX1P55347 436 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 ASPHQ12797 758 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 KCNAB2Q13303 367 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 RUNX2Q13950 521 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 CASP8Q14790 479 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 AP5B1Q2VPB7 878 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 TCHHL1Q5QJ38 904 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 DCAF10Q5QP82 559 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 DEPDC1Q5TB30 811 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 KIRREL2Q6UWL6 708 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 ZNF793Q6ZN11 406 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 UBE3DQ7Z6J8 389 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 EXOC3L1Q86VI1 746 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 CLEC1AQ8NC01 280 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 MYRIPQ8NFW9 859 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 OR11G2Q8NGC1 345 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 ADAMTS18Q8TE60 1221 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 AGAP11Q8TF27 550 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 SELENOMQ8WWX9 145 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 RGMAQ96B86 450 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 WBP1Q96G27 269 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 BBC3Q96PG8 261 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 HBEGFQ99075 208 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 SERPINI1Q99574 410 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 TBCDQ9BTW9 1192 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 MECRQ9BV79 373 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 SORBS1Q9BX66 1292 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 NPLQ9BXD5 320 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 SLC29A3Q9BZD2 475 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 ADNPQ9H2P0 1102 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 CLK4Q9HAZ1 481 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 PRDM7Q9NQW5 492 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 LANCL2Q9NS86 450 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 FARSBQ9NSD9 589 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 ZNF225Q9UK10 706 aa9.98□□□□□ -0.81
HNRNPC-232ENST00000557442 MKRN2OSH3BPM6 223 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 MASP2O00187 686 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 PCDH17O14917 1159 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 TRIM13O60858 407 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 CRCPO75575 148 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 ETHE1O95571 254 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 ESRRBO95718 433 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 PDYNP01213 254 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 KRT6AP02538 564 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 KRT6BP04259 564 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 ENO1P06733 434 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 COX6A1P12074 109 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 HIST1H1TP22492 207 aaPredicted RBP9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 ATP5A1P25705 553 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 ALDH3A1P30838 453 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 TSFMP43897 325 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 KRT6CP48668 564 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 CCL11P51671 97 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 LIM2P55344 173 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 RAB38P57729 211 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 RHAGQ02094 409 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 CUL3Q13618 768 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 ABRAXAS2Q15018 415 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 TNFAIP8L3Q5GJ75 292 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 OR4C11Q6IEV9 310 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 LANCL3Q6ZV70 420 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 NUDT13Q86X67 352 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 EFCAB3Q8N7B9 438 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 EXD3Q8N9H8 876 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 ACOT4Q8N9L9 421 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 FAM47BQ8NA70 645 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 METTL6Q8TCB7 284 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 SREK1Q8WXA9 508 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 TSLPQ969D9 159 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 KCNA7Q96RP8 456 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 SSU72Q9NP77 194 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 C19orf25Q9UFG5 118 aaPredicted RBP9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 PPT2Q9UMR5 302 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 DAPP1Q9UN19 280 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 G3BP2Q9UN86 482 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms