RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 KCNU1A8MYU2 1149 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 OR7A17O14581 309 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 JUNP05412 331 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 WNT3AP56704 352 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 OR4K1Q8NGD4 311 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SAMD11Q96NU1 681 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 A0A087WUU8 490 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 C2orf92A0A1B0GVN3 265 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 KCNJ13O60928 360 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF286BP0CG31 522 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 ALAS2P22557 587 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 CCINQ13939 588 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SIRT2Q8IXJ6 389 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 OR13C3Q8NGS6 347 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 OR8K5Q8NH50 307 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SNRNP25Q9BV90 132 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 COQ10BQ9H8M1 238 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TRAV6A0A075B6T7 132 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D3DA0A087WVF3 549 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D3IA0A087WXS9 549 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D3EA0A087X179 549 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D3KA0A087X1G2 549 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D3FA6NER0 549 aaPredicted RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D3LB9A6J9 549 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SHBGP04278 402 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 ZDHHC11BP0C7U3 371 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D3HP0C7X1 549 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 GP1BBP13224 206 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SRPXP78539 464 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 NADK2Q4G0N4 442 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D3GQ6DHY5 549 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D3CQ6IPX1 549 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TMEM53Q6P2H8 277 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 POMZP3Q6PJE2 187 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D3Q8IZP1 549 aaPredicted RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 OR5H2Q8NGV7 314 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 JSRP1Q96MG2 331 aaPredicted RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 GAS2L1Q99501 681 aaPredicted RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 CHST7Q9NS84 486 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 EIF2B4Q9UI10 523 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 C12orf71A8MTZ7 269 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 hCG_2039718K7EN88 272 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SLC7A4O43246 635 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TRIM46Q7Z4K8 759 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TMLHEQ9NVH6 421 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 MYPNQ86TC9 1320 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 WNK2Q9Y3S1 2297 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 GPR75-ASB3A0A0A6YYF3 556 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 LRP5LA4QPB2 252 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 CDRT1O95170 752 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 PFKLP17858 780 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 NFYBP25208 207 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 NUDT1P36639 197 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 GMPRP36959 345 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 UBE2G2P60604 165 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 HBG1P69891 147 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 HBG2P69892 147 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SNTB2Q13425 540 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 GPR33Q49SQ1 333 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 COMMD7Q86VX2 200 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 CASTOR1Q8WTX7 329 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SENP8Q96LD8 212 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF559Q9BR84 538 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 PELOQ9BRX2 385 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 EBF3Q9H4W6 596 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF850A8MQ14 1090 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SEPT4O43236 478 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 CD34P28906 385 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 LEPRP48357 1165 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 GPR143P51810 404 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 CASP6P55212 293 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TLE4Q04727 773 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TCTE3Q8IZS6 198 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SGCEO43556 437 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 NOBOXO60393 691 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 MRPS5P82675 430 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 REEP3Q6NUK4 255 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 RBMS3Q6XE24 437 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TSSK2Q96PF2 358 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 PCDHAC1Q9H158 963 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 KLHL21Q9UJP4 597 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 NCOA3Q9Y6Q9 1424 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SCAMP1O15126 338 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 OLFM2O95897 454 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 HNRNPH3P31942 346 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 MAGEB1P43366 347 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 GSTM4Q03013 218 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 C3orf67Q6ZVT6 689 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 ZBTB46Q86UZ6 589 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 RCBTB1Q8NDN9 531 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 SETD7Q8WTS6 366 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 NANOS1Q8WY41 292 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 POP1Q99575 1024 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 MAGEH1Q9H213 219 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PIH1D1Q9NWS0 290 aaKnown RBP8.54□□□□□ -1.04
SYNE3-205ENST00000557275 KLHL9Q9P2J3 617 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 KLHL33A6NCF5 533 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 CIDEAO60543 219 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 KCNC3Q14003 757 aa8.54□□□□□ -1.04
SYNE3-205ENST00000557275 PAN2Q504Q3 1202 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms