RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	KARS	Q15046	597 aa	Known RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SSX2	Q16385	188 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PPP1R3A	Q16821	1122 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MCMDC2	Q4G0Z9	681 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	EPC2	Q52LR7	807 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TNFAIP8L3	Q5GJ75	292 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PDSS1	Q5T2R2	415 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TBC1D3G	Q6DHY5	549 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TBC1D3C	Q6IPX1	549 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	KRTAP5-4	Q6L8H1	288 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TTI2	Q6NXR4	508 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	FRA10AC1	Q70Z53	315 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	EFL1	Q7Z2Z2	1120 aa	Known RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TDRP	Q86YL5	185 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SLC13A5	Q86YT5	568 aa	Predicted RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	NUDCD3	Q8IVD9	361 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MCOLN2	Q8IZK6	566 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TBC1D3	Q8IZP1	549 aa	Predicted RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ALLC	Q8N6M5	410 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	UBL4B	Q8N7F7	174 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	LINC01465	Q8N7H1	131 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	RTL3	Q8N8U3	475 aa	Known RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SLC37A3	Q8NCC5	494 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PSPC1	Q8WXF1	523 aa	Known RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CD101	Q93033	1021 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TAMM41	Q96BW9	452 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MTBP	Q96DY7	904 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	FEM1C	Q96JP0	617 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PPP1R36	Q96LQ0	422 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TMEM204	Q9BSN7	226 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZYG11B	Q9C0D3	744 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MMP27	Q9H306	513 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PIGU	Q9H490	435 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MAGEE1	Q9HCI5	957 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TRIM36	Q9NQ86	728 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	DECR2	Q9NUI1	292 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	THUMPD1	Q9NXG2	353 aa	Known RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	DDX43	Q9NXZ2	648 aa	Known RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	HCN3	Q9P1Z3	774 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CTSF	Q9UBX1	484 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	HSPB7	Q9UBY9	170 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	GNPTG	Q9UJJ9	305 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MRPS7	Q9Y2R9	242 aa	Known RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ADAM18	Q9Y3Q7	739 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	RIPK3	Q9Y572	518 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	COPG1	Q9Y678	874 aa	Known RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	KCNE2	Q9Y6J6	123 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PIK3C2B	O00750	1634 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZCCHC11	Q5TAX3	1644 aa	Known RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TRIP12	Q14669	1992 aa	Predicted RBP	5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	KIAA0232	Q92628	1395 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	FAM135B	Q49AJ0	1406 aa		5.05	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ATP7A	Q04656	1500 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	LRRC53	A6NM62	1247 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZNF729	A6NN14	1252 aa	Predicted RBP	5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TAF4	O00268	1085 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CCRL2	O00421	344 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	SLC30A4	O14863	429 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	EIF3D	O15371	548 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	AP5Z1	O43299	807 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CHMP2A	O43633	222 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	RHBDL1	O75783	438 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	LGI1	O95970	557 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MB	P02144	154 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	APOA1	P02647	267 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	KRT8	P05787	483 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	IGFBP2	P18065	325 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	RAB3A	P20336	220 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	PRPS1L1	P21108	318 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CHRNA5	P30532	468 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	YWHAB	P31946	246 aa	Known RBP	5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	EIF2D	P41214	584 aa	Known RBP	5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ACTR1B	P42025	376 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MTNR1A	P48039	350 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	FHIT	P49789	147 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	DGKQ	P52824	942 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	METAP1	P53582	386 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TAS2R60	P59551	318 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	RPL7A	P62424	266 aa	Known RBP	5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CCZ1B	P86790	482 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CCZ1	P86791	482 aa	Predicted RBP	5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CDK16	Q00536	496 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	HSF1	Q00613	529 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	TLE3	Q04726	772 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	STX5	Q13190	355 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	FLOT2	Q14254	428 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	NAB2	Q15742	525 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	KYNU	Q16719	465 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MTHFSD	Q2M296	383 aa	Known RBP	5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZNF667	Q5HYK9	610 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	MPP7	Q5T2T1	576 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	LIPN	Q5VXI9	398 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CYP20A1	Q6UW02	462 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZNF793	Q6ZN11	406 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	GPR65	Q8IYL9	337 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ZNF679	Q8IYX0	411 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	CYP4Z2P	Q8N1L4	340 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	FRMD1	Q8N878	549 aa		5.04	□□□□□ -1.6
RALGAPA1-215	ENST00000556839	ST7L	Q8TDW4	575 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms