RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 NXPE2Q96DL1 559 aa4.8□□□□□ -1.64
HIF1A-209ENST00000556827 QRFPRQ96P65 431 aa4.8□□□□□ -1.64
HIF1A-209ENST00000556827 LHX5Q9H2C1 402 aa4.8□□□□□ -1.64
HIF1A-209ENST00000556827 CYP3A43Q9HB55 503 aa4.8□□□□□ -1.64
HIF1A-209ENST00000556827 EPB41L5Q9HCM4 733 aa4.8□□□□□ -1.64
HIF1A-209ENST00000556827 OGFRQ9NZT2 677 aa4.8□□□□□ -1.64
HIF1A-209ENST00000556827 THAP10Q9P2Z0 257 aaPredicted RBP4.8□□□□□ -1.64
HIF1A-209ENST00000556827 TBC1D29Q9UFV1 150 aa4.8□□□□□ -1.64
HIF1A-209ENST00000556827 SUN2Q9UH99 717 aa4.8□□□□□ -1.64
HIF1A-209ENST00000556827 RASAL2Q9UJF2 1139 aa4.8□□□□□ -1.64
HIF1A-209ENST00000556827 F5P12259 2224 aa4.8□□□□□ -1.64
HIF1A-209ENST00000556827 DOCK6Q96HP0 2047 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 A0A0B4J293 547 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 FAM47DPA6NHR8 397 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 LILRA5A6NI73 299 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 LRRC72A6NJI9 287 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 PDXKO00764 312 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 POLR2DO15514 142 aaKnown RBP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 STX10O60499 249 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 KRT36O76013 467 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 YEATS4O95619 227 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 LDOC1O95751 146 aaPredicted RBP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 SEMA4FO95754 770 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 IGLV3-19P01714 112 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 HIST1H2ABP04908 130 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 SRPRAP08240 638 aaKnown RBP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 POLR2EP19388 210 aaKnown RBP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 HIST1H2ADP20671 130 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 CD27P26842 260 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 MSH2P43246 934 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 CASP4P49662 377 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 VAMP7P51809 220 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 MFAP3P55082 362 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 MC1RQ01726 317 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 RUNX1T1Q06455 604 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 ILF3Q12906 894 aaKnown RBP eCLIP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 ZNF234Q14588 700 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 ZNF776Q68DI1 518 aaPredicted RBP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 FAM173BQ6P4H8 233 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 PAPD4Q6PIY7 484 aaKnown RBP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 CLEC20AQ6ZU45 233 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 ASB18Q6ZVZ8 466 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 HIST3H2AQ7L7L0 130 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 CCDC186Q7Z3E2 898 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 CACUL1Q86Y37 369 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 KMT5CQ86Y97 462 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 TICAM1Q8IUC6 712 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 RFLNBQ8N5W9 214 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 C12orf29Q8N999 325 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 LINC00301Q8NCQ3 95 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 UTP15Q8TED0 518 aaKnown RBP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 TMA16Q96EY4 203 aaKnown RBP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 CCDC34Q96HJ3 373 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 TIGD1Q96MW7 591 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 USP28Q96RU2 1077 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 OMDQ99983 421 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 SEMA3CQ99985 751 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 DDX50Q9BQ39 737 aaKnown RBP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 DUSP16Q9BY84 665 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 UBXN6Q9BZV1 441 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 EVA1AQ9H8M9 152 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 SGK2Q9HBY8 427 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 KLHL9Q9P2J3 617 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 CFAP45Q9UL16 551 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 SCML1Q9UN30 329 aa4.79□□□□□ -1.64
HIF1A-209ENST00000556827 NUP210Q8TEM1 1887 aaPredicted RBP4.79□□□□□ -1.64
HIF1A-209ENST00000556827 A0A087WV48 116 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 FAM149AA5PLN7 773 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 LRRIQ3A6PVS8 624 aaPredicted RBP4.78□□□□□ -1.64
HIF1A-209ENST00000556827 AGAP14A8MT82 685 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 XPNPEP2O43895 674 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 MAGEC1O60732 1142 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 GPC4O75487 556 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 DAB1O75553 588 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 BEST1O76090 585 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 GFPT2O94808 682 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 MOCS3O95396 460 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 ASS1P00966 412 aaKnown RBP4.78□□□□□ -1.64
HIF1A-209ENST00000556827 HLA-DRAP01903 254 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 NR3C1P04150 777 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 F7P08709 466 aaPredicted RBP4.78□□□□□ -1.64
HIF1A-209ENST00000556827 ACSL1P33121 698 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 HOXD13P35453 343 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 NNMTP40261 264 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 GPR143P51810 404 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 TKTL1P51854 596 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 CD81P60033 236 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 YWHAGP61981 247 aaKnown RBP eCLIP4.78□□□□□ -1.64
HIF1A-209ENST00000556827 YWHAEP62258 255 aaKnown RBP4.78□□□□□ -1.64
HIF1A-209ENST00000556827 NUCB2P80303 420 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 SEMG2Q02383 582 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 SPOCK1Q08629 439 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 INCA1Q0VD86 236 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 CUL4AQ13619 759 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 ENPP2Q13822 863 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 GTF2H2Q13888 395 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 ATL3Q6DD88 541 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 TRNP1Q6NT89 227 aa4.78□□□□□ -1.64
HIF1A-209ENST00000556827 GTF2H2CQ6P1K8 395 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms