RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 LAMA1P25391 3075 aa17.45■□□□□ 0.38
SDR39U1-220ENST00000556548 COL6A3P12111 3177 aa17.45■□□□□ 0.38
SDR39U1-220ENST00000556548 TMEM265A0A087WTH1 108 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 A6NCN8 305 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 H0YJX3 145 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 GNGT2O14610 69 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 PRKRAO75569 313 aaKnown RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 CCNDBP1O95273 360 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 THEGLP0DJG4 465 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 DDCP20711 480 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 RABIFP47224 123 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 ILF3Q12906 894 aaKnown RBP eCLIP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 C1orf61Q13536 156 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 PTCRAQ6ISU1 281 aaPredicted RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 ZNF793Q6ZN11 406 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 IKBIPQ70UQ0 350 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 DGLUCYQ7Z3D6 616 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 ABI3BPQ7Z7G0 1075 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 HS3ST5Q8IZT8 346 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 FAM47BQ8NA70 645 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 EXOSC8Q96B26 276 aaKnown RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 PYURFQ96I23 114 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 PITHD1Q9GZP4 211 aaPredicted RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 FAM192AQ9GZU8 254 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 SOX17Q9H6I2 414 aaPredicted RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 SLAMF7Q9NQ25 335 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 WSB2Q9NYS7 404 aaPredicted RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 ERI3O43414 337 aaKnown RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 KDM1AO60341 852 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 CLEC3AO75596 197 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 SNRNP200O75643 2136 aaKnown RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 TNFP01375 233 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 SERPINB1P30740 379 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 CHI3L1P36222 383 aaPredicted RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 MYBPC3Q14896 1274 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 VTCN1Q7Z7D3 282 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 TRIM48Q8IWZ4 208 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 SYNPOQ8N3V7 929 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 TRNAU1APQ9NX07 287 aaKnown RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 TAS2R9Q9NYW1 312 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 OR6C2Q9NZP2 312 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 PCOLCE2Q9UKZ9 415 aa17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 FAF1Q9UNN5 650 aaPredicted RBP17.44■□□□□ 0.38
SDR39U1-220ENST00000556548 GLOD5A6NK44 160 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 CLIC3O95833 236 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 GNAO1P09471 354 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 POLR2CP19387 275 aaPredicted RBP17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 CD6P30203 668 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 KDELR2P33947 212 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 ABATP80404 500 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 MYBPC1Q00872 1141 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 GPR18Q14330 331 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 CHERPQ8IWX8 916 aaKnown RBP17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 OR52E4Q8NGH9 312 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 OR8K5Q8NH50 307 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 CYGBQ8WWM9 190 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 MTERF3Q96E29 417 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 CHST8Q9H2A9 424 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 U3KQV3 271 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 GSAPA4D1B5 854 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 NDUFS1P28331 727 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 RAB8AP61006 207 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 HYAL2Q12891 473 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 EIF2B5Q13144 721 aaKnown RBP17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 HEPACAMQ14CZ8 416 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 SLC5A12Q1EHB4 618 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 FOXB2Q5VYV0 432 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 STK32CQ86UX6 486 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 ZNF761Q86XN6 746 aaPredicted RBP17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 RNF130Q86XS8 419 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 ZNF687Q8N1G0 1237 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 PACRGLQ8N7B6 248 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 GOT1L1Q8NHS2 421 aaPredicted RBP17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 SLC6A18Q96N87 628 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 QRFPRQ96P65 431 aa17.43■□□□□ 0.38
SDR39U1-220ENST00000556548 KRBA1A5PL33 1030 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 OR6C74A6NCV1 312 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 DIRAS1O95057 198 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 SNAP29O95721 258 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 RPS9P46781 194 aaKnown RBP17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 MVDP53602 400 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 MANFP55145 182 aaKnown RBP17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 HSPB3Q12988 150 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 ZIK1Q3SY52 487 aaPredicted RBP17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 TOR1AIP1Q5JTV8 583 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 ANKRD34AQ69YU3 496 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 ERICH5Q6P6B1 374 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 TTLQ8NG68 377 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 TFAP2CQ92754 450 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 MS4A6EQ96DS6 147 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 TPD52L3Q96J77 140 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 CXorf36Q9H7Y0 433 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 VCX3AQ9NNX9 186 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 DUSP12Q9UNI6 340 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 A0A1B0GTW7 788 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 IGLV3-19P01714 112 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 FAM58BPP0C7Q3 252 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 PPIBP23284 216 aaKnown RBP17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 PTGER1P34995 402 aa17.42■□□□□ 0.38
SDR39U1-220ENST00000556548 CCR5P51681 352 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms