RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 ZFP62Q8NB50 900 aaPredicted RBP16.44■□□□□ 0.22
SDR39U1-219ENST00000556523 C16orf52Q8NHV5 167 aa16.44■□□□□ 0.22
SDR39U1-219ENST00000556523 CREB3L4Q8TEY5 395 aa16.44■□□□□ 0.22
SDR39U1-219ENST00000556523 ZNF592Q92610 1267 aa16.44■□□□□ 0.22
SDR39U1-219ENST00000556523 NCLNQ969V3 563 aa16.44■□□□□ 0.22
SDR39U1-219ENST00000556523 SMIM10Q96HG1 83 aa16.44■□□□□ 0.22
SDR39U1-219ENST00000556523 DDX47Q9H0S4 455 aaKnown RBP16.44■□□□□ 0.22
SDR39U1-219ENST00000556523 TP63Q9H3D4 680 aaPredicted RBP16.44■□□□□ 0.22
SDR39U1-219ENST00000556523 HPF1Q9NWY4 346 aa16.44■□□□□ 0.22
SDR39U1-219ENST00000556523 DCHS2Q6V1P9 2916 aa16.44■□□□□ 0.22
SDR39U1-219ENST00000556523 A0A0G2JN53 185 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 FOXO6A8MYZ6 492 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 ACOT7O00154 380 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 ERI3O43414 337 aaKnown RBP16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 B3GALT2O43825 422 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 URI1O94763 535 aaPredicted RBP16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 WDR47O94967 919 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 GNAZP19086 355 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 CHRNB4P30926 498 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 HPDP32754 393 aaPredicted RBP16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 ELK3P41970 407 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 HNMTP50135 292 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 RAB38P57729 211 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 CDKL1Q00532 357 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 PLGLB1Q02325 96 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 WHAMMP3Q1A5X7 153 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 HP1BP3Q5SSJ5 553 aaPredicted RBP16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 PAOXQ6QHF9 649 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 SYDE1Q6ZW31 735 aaPredicted RBP16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 ADAMTSL2Q86TH1 951 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 IGDCC3Q8IVU1 814 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 SCUBE1Q8IWY4 988 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 GPALPP1Q8IXQ4 340 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 KRT78Q8N1N4 520 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 FAM47BQ8NA70 645 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 SPATA4Q8NEY3 305 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 ASB15Q8WXK1 588 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 RND1Q92730 232 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 NPLQ9BXD5 320 aaPredicted RBP16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 COPS7BQ9H9Q2 264 aaPredicted RBP16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 ADAP2Q9NPF8 381 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 IKZF3Q9UKT9 509 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 YARS2Q9Y2Z4 477 aaKnown RBP16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 OARD1Q9Y530 152 aa16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 INTS1Q8N201 2190 aaKnown RBP16.43■□□□□ 0.22
SDR39U1-219ENST00000556523 CDC7O00311 574 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 ZFAND5O76080 213 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 PDE9AO76083 593 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 C1GALT1C1LP0DN25 315 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 GSTM2P28161 218 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 HSD17B7P56937 341 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 CKAP4Q07065 602 aaKnown RBP16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 RCN2Q14257 317 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 SLBPQ14493 270 aaKnown RBP eCLIP16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 TRMT10BQ6PF06 316 aaKnown RBP16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 MDGA2Q7Z553 956 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 KLHDC8AQ8IYD2 350 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 ACBD4Q8NC06 268 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 PSD4Q8NDX1 1056 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 ANKRD7Q92527 254 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 LRRC39Q96DD0 335 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 KCMF1Q9P0J7 381 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 CTNNAL1Q9UBT7 734 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 MED13LQ71F56 2210 aa16.42■□□□□ 0.22
SDR39U1-219ENST00000556523 FAM95CA0A1B0GW59 222 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 ZNF500O60304 480 aaPredicted RBP16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 IFNA16P05015 189 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 PPP2R1BP30154 601 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 BMPR2Q13873 1038 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 RUNX2Q13950 521 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 MORF4L2Q15014 288 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 STEAP4Q687X5 459 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 TRIM40Q6P9F5 258 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 TMIGD1Q6UXZ0 262 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 ZNF595Q8IYB9 648 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 TMEM132CQ8N3T6 1108 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 MARVELD2Q8N4S9 558 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 OR52N2Q8NGI0 321 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 OR5M3Q8NGP4 307 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 MS4A6EQ96DS6 147 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 VPS39Q96JC1 886 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 TREX2Q9BQ50 279 aaPredicted RBP16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 AICDAQ9GZX7 198 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 PLAC1Q9HBJ0 212 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 PRM3Q9NNZ6 103 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 PLSCR2Q9NRY7 297 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 ZNF223Q9UK11 482 aaPredicted RBP16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 PPIEQ9UNP9 301 aaKnown RBP16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 RNF6Q9Y252 685 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 CLCA3PQ9Y6N3 262 aa16.41■□□□□ 0.22
SDR39U1-219ENST00000556523 CELSR1Q9NYQ6 3014 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 HIVEP1P15822 2718 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 ZNF407Q9C0G0 2248 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 NKX2-6A6NCS4 301 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 ANKDD1BA6NHY2 528 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 FAM166BA8MTA8 275 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 OR2J2O76002 312 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 HNRNPH1P31943 449 aaKnown RBP16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 DEKP35659 375 aaKnown RBP16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 PLA2G16P53816 162 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms