RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TMPRSS11BQ86T26 416 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 IQCF2Q8IXL9 164 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 RPAP2Q8IXW5 612 aaPredicted RBP4.09□□□□□ -1.75
PRPF39-209ENST00000556353 AQP11Q8NBQ7 271 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 MNS1Q8NEH6 495 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 SLAMF9Q96A28 289 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 SLC45A3Q96JT2 553 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 GUCD1Q96NT3 240 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 CHCHD6Q9BRQ6 235 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 RPP25Q9BUL9 199 aaKnown RBP4.09□□□□□ -1.75
PRPF39-209ENST00000556353 BOLA2Q9H3K6 86 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 Q9N2K0 584 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 IKBKGQ9Y6K9 419 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 ITIH6Q6UXX5 1313 aa4.09□□□□□ -1.75
PRPF39-209ENST00000556353 KIAA1671Q9BY89 1806 aa4.09□□□□□ -1.76
PRPF39-209ENST00000556353 ZDBF2Q9HCK1 2354 aa4.09□□□□□ -1.76
PRPF39-209ENST00000556353 DCHS1Q96JQ0 3298 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 LOC102723996A0A087X1L8 192 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 FAM170AA1A519 330 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 A6NCN8 305 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 TMEM110-MUSTN1A8MSY1 372 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 MPHOSPH10O00566 681 aaKnown RBP4.08□□□□□ -1.76
PRPF39-209ENST00000556353 ASTN1O14525 1302 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 ZNF292O60281 2723 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 HPRP00739 348 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 CCDC175P0C221 793 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 PAX7P23759 505 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 LRIT3Q3SXY7 679 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 UGT3A2Q3SY77 523 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 HYIQ5T013 277 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 C12orf60Q5U649 245 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 NOTUMQ6P988 496 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 C16orf87Q6PH81 154 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 FRRS1Q6ZNA5 592 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 ARHGAP22Q7Z5H3 698 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 CATSPERDQ86XM0 798 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 TDHQ8IZJ6 230 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 POM121L12Q8N7R1 296 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 C17orf47Q8NEP4 570 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 GIMAP1Q8WWP7 306 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 SYN2Q92777 582 aaPredicted RBP4.08□□□□□ -1.76
PRPF39-209ENST00000556353 SYAP1Q96A49 352 aaPredicted RBP4.08□□□□□ -1.76
PRPF39-209ENST00000556353 SPDL1Q96EA4 605 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 FAM20AQ96MK3 541 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 SERINC2Q96SA4 455 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 TEX12Q9BXU0 123 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 MTMR12Q9C0I1 747 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 CHST11Q9NPF2 352 aa4.08□□□□□ -1.76
PRPF39-209ENST00000556353 DDX49Q9Y6V7 483 aaKnown RBP4.08□□□□□ -1.76
PRPF39-209ENST00000556353 PLIN4Q96Q06 1357 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 SLC15A5A6NIM6 579 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 H0YAE9 185 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 PGK2P07205 417 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 DNAH10OSP0CZ25 163 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 PRKAR1AP10644 381 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 HAPLN1P10915 354 aaPredicted RBP4.07□□□□□ -1.76
PRPF39-209ENST00000556353 EEF2P13639 858 aaKnown RBP4.07□□□□□ -1.76
PRPF39-209ENST00000556353 CAPN3P20807 821 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 SAT1P21673 171 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 STAT2P52630 851 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 LIMK2P53671 638 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 CDH13P55290 713 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 TRIM29Q14134 588 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 MTF1Q14872 753 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 CES4AQ5XG92 561 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 CTR9Q6PD62 1173 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 Q6ZR54 194 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 C4orf50Q6ZRC1 276 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 C1orf122Q6ZSJ8 110 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 TMEM179Q6ZVK1 233 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 DEFB123Q8N688 67 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 LRRC15Q8TF66 581 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 SPACA9Q96E40 222 aaPredicted RBP4.07□□□□□ -1.76
PRPF39-209ENST00000556353 THOC1Q96FV9 657 aaKnown RBP4.07□□□□□ -1.76
PRPF39-209ENST00000556353 SPAG5Q96R06 1193 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 CRNKL1Q9BZJ0 848 aaKnown RBP4.07□□□□□ -1.76
PRPF39-209ENST00000556353 TSPYL1Q9H0U9 437 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 VCPKMTQ9H867 229 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 COMMD8Q9NX08 183 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 CHCHD3Q9NX63 227 aaKnown RBP4.07□□□□□ -1.76
PRPF39-209ENST00000556353 XPO7Q9UIA9 1087 aaKnown RBP4.07□□□□□ -1.76
PRPF39-209ENST00000556353 DDX19BQ9UMR2 479 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 PADI2Q9Y2J8 665 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 TMED3Q9Y3Q3 217 aa4.07□□□□□ -1.76
PRPF39-209ENST00000556353 HCFC1P51610 2035 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 LOC105371242A0A075B767 164 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 GTPBP10A4D1E9 387 aaKnown RBP4.06□□□□□ -1.76
PRPF39-209ENST00000556353 A8MU10 97 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 VGLL3A8MV65 326 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 FAM25EA8MYX2 175 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 PI4K2BG5E9Z4 385 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 WDR46O15213 610 aaKnown RBP4.06□□□□□ -1.76
PRPF39-209ENST00000556353 PRDM1O75626 825 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 TSPAN9O75954 239 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 FLOT1O75955 427 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 NDUFB10O96000 172 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 CCDC172P0C7W6 258 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 DANCRP0C864 163 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 ITIH1P19827 911 aa4.06□□□□□ -1.76
PRPF39-209ENST00000556353 DNASE1P24855 282 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms