RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 SYTL1Q8IYJ3 562 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 SLC22A15Q8IZD6 547 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 MYO1HQ8N1T3 1032 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 MMGT1Q8N4V1 131 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 NOA1Q8NC60 698 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 PPFIBP2Q8ND30 876 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ZNF248Q8NDW4 579 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 IL17RDQ8NFM7 739 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 OR5K2Q8NHB8 316 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 FBXO25Q8TCJ0 367 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 MCOLN3Q8TDD5 553 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ZFPM2Q8WW38 1151 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 LPGAT1Q92604 370 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CDKL2Q92772 493 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 RAD51AP1Q96B01 352 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 RGMAQ96B86 450 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 LRRC39Q96DD0 335 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CLIP3Q96DZ5 547 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 LINGO1Q96FE5 620 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 MED8Q96G25 268 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 BIRC8Q96P09 236 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 NEU1Q99519 415 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 H2AFJQ9BTM1 129 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ACAT2Q9BWD1 397 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 TRIM54Q9BYV2 358 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ULBP3Q9BZM4 244 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 UNKQ9C0B0 810 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 P2RY12Q9H244 342 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 TFB2MQ9H5Q4 396 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 UCK1Q9HA47 277 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 FANCEQ9HB96 536 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CPNE5Q9HCH3 593 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 PDE7BQ9NP56 450 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 AKIP1Q9NQ31 210 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 TAS2R13Q9NYV9 303 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 SERTAD3Q9UJW9 196 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 RARRES3Q9UL19 164 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ICKQ9UPZ9 632 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 DHRS7Q9Y394 339 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 IKBKGQ9Y6K9 419 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 NCOR2Q9Y618 2525 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 NUP210LQ5VU65 1888 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CHD8Q9HCK8 2581 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CACNA1AO00555 2505 aa4.46□□□□□ -1.69
ATXN3-238ENST00000556288 GAGE12BA1L429 117 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 CDHR4A6H8M9 788 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 GAGE12HA6NDE8 117 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 TLCD2A6NGC4 264 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 EIF4E1BA6NMX2 242 aaKnown RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 TMEM150CB9EJG8 249 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 EIF3HO15372 352 aaKnown RBP eCLIP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 NVLO15381 856 aaKnown RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ZNF500O60304 480 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 GPC4O75487 556 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 SPAG6O75602 509 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FAM155BO75949 473 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 KIAA0754O94854 1291 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 SLCO2B1O94956 709 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 C1orf105O95561 183 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ACSL3O95573 720 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ZBTB11O95625 1053 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 C9P02748 559 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 SERPIND1P05546 499 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 KLK3P07288 261 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ITGA2BP08514 1039 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 THRAP10827 490 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FOLR1P15328 257 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ST6GAL1P15907 406 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 UGT2B7P16662 529 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 NELFEP18615 380 aaKnown RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 CYP2A7P20853 494 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 CD9P21926 228 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 PHBP35232 272 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 PTGS2P35354 604 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 MAGEA3P43357 314 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 CAPZBP47756 277 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 PDX1P52945 283 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 CDKN2DP55273 166 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ERVPABLB-1P60509 514 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ACY1Q03154 408 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 TUBB3Q13509 450 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 TYSND1Q2T9J0 566 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FLYWCH1Q4VC44 716 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 GLE1Q53GS7 698 aaKnown RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FNDC7Q5VTL7 733 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FAM45BPQ6NSW5 357 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FAM199XQ6PEV8 388 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FIGLAQ6QHK4 219 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 UNC5DQ6UXZ4 953 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FRA10AC1Q70Z53 315 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 PIWIL4Q7Z3Z4 852 aaKnown RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 PPP1R3BQ86XI6 285 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ADGRF3Q8IZF5 1079 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 CACNA2D3Q8IZS8 1091 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 SPATA6LQ8N4H0 392 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 OR56A1Q8NGH5 318 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 OR9A1PQ8NGU1 263 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 TBC1D15Q8TC07 691 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FAM45AQ8TCE6 357 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ZNF483Q8TF39 744 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms