RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 CCT6BQ92526 530 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 ESAMQ96AP7 390 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 RHBDF1Q96CC6 855 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 LRRC39Q96DD0 335 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 MS4A6EQ96DS6 147 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 QRFPRQ96P65 431 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 DMRTA2Q96SC8 542 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 TMEM79Q9BSE2 394 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 MCMBPQ9BTE3 642 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 CAB39LQ9H9S4 337 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 CLK4Q9HAZ1 481 aaKnown RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 CTNNAL1Q9UBT7 734 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 FBXW2Q9UKT8 454 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 MTO1Q9Y2Z2 717 aaKnown RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 CCDC168Q8NDH2 2452 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 A0A1B0GTH9 108 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 PINLYPA6NC86 204 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 URADA6NGE7 173 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 TMEM200CA6NKL6 621 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 ERI3O43414 337 aaKnown RBP12.38□□□□□ -0.43
TGFB3-204ENST00000556285 PEX1O43933 1283 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 HS6ST1O60243 411 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 ITGA10O75578 1167 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 KRT38O76015 456 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 WISP3O95389 354 aaPredicted RBP12.38□□□□□ -0.43
TGFB3-204ENST00000556285 TCP1P17987 556 aaKnown RBP12.38□□□□□ -0.43
TGFB3-204ENST00000556285 RPL21P46778 160 aaKnown RBP12.38□□□□□ -0.43
TGFB3-204ENST00000556285 TESK1Q15569 626 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 TMIGD1Q6UXZ0 262 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 SYDE1Q6ZW31 735 aaPredicted RBP12.38□□□□□ -0.43
TGFB3-204ENST00000556285 KLHDC8AQ8IYD2 350 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 MARVELD2Q8N4S9 558 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 ANKRD7Q92527 254 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 NCLNQ969V3 563 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 GAL3ST3Q96A11 431 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 TMEM125Q96AQ2 219 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 CSF3RQ99062 836 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 GPAMQ9HCL2 828 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 PRTFDC1Q9NRG1 225 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 DEPPQ9NTK1 212 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 ZNF490Q9ULM2 529 aaPredicted RBP12.38□□□□□ -0.43
TGFB3-204ENST00000556285 MMACHCQ9Y4U1 282 aa12.38□□□□□ -0.43
TGFB3-204ENST00000556285 PHF3Q92576 2039 aaKnown RBP12.38□□□□□ -0.43
TGFB3-204ENST00000556285 NCKAP5O14513 1909 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 ZNF407Q9C0G0 2248 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 CXorf49A8MYA2 514 aaPredicted RBP12.37□□□□□ -0.43
TGFB3-204ENST00000556285 E7ESA3 106 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 FCHO1O14526 889 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 TFECO14948 347 aaPredicted RBP12.37□□□□□ -0.43
TGFB3-204ENST00000556285 ZSCAN12O43309 604 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 CDC40O60508 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
TGFB3-204ENST00000556285 H2AFYO75367 372 aaKnown RBP12.37□□□□□ -0.43
TGFB3-204ENST00000556285 PDE9AO76083 593 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 GNAZP19086 355 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 CD22P20273 847 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 CERS1P27544 350 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 HNMTP50135 292 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 CLCN2P51788 898 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 PLA2G16P53816 162 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 RAB38P57729 211 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 STXBP1P61764 594 aaKnown RBP12.37□□□□□ -0.43
TGFB3-204ENST00000556285 CMPK2Q5EBM0 449 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 XKR6Q5GH73 641 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 CYP4Z2PQ8N1L4 340 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 ARMC2Q8NEN0 867 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 OR52N2Q8NGI0 321 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 SDCCAG3Q96C92 435 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 VPS39Q96JC1 886 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 FAR2Q96K12 515 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 RHOJQ9H4E5 214 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 KCMF1Q9P0J7 381 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 PPT2Q9UMR5 302 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 PPIEQ9UNP9 301 aaKnown RBP12.37□□□□□ -0.43
TGFB3-204ENST00000556285 KLF13Q9Y2Y9 288 aaPredicted RBP12.37□□□□□ -0.43
TGFB3-204ENST00000556285 SNX24Q9Y343 169 aa12.37□□□□□ -0.43
TGFB3-204ENST00000556285 A0A0G2JMM0 328 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 A0A1W2PPB8 328 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 A0A1W2PRS3 328 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 KIR3DP1A8MWS1 328 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 E9PLN8 166 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 CYR61O00622 381 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 CDK2AP1O14519 115 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 PRRG2O14669 202 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 PHGDHO43175 533 aaKnown RBP12.36□□□□□ -0.43
TGFB3-204ENST00000556285 OR2J2O76002 312 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 EPORP19235 508 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 TFEBP19484 476 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 PTGS2P35354 604 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 HSPA7P48741 367 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 SLC13A2Q13183 592 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 TGFBIQ15582 683 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 OR4D1Q15615 310 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 FRA10AC1Q70Z53 315 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 ADAMTSL2Q86TH1 951 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 CD163Q86VB7 1156 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 ZBED8Q8IZ13 594 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 RPRMLQ8N4K4 120 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 TMEM156Q8N614 296 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 ZNF321PQ8N8H1 164 aa12.36□□□□□ -0.43
TGFB3-204ENST00000556285 ACBD4Q8NC06 268 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms