RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 CCT8L1PA6NM43 557 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 C4orf51C9J302 202 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 H3BMH7 237 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 TM4SF5O14894 197 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 POLR1CO15160 346 aaPredicted RBP10.46□□□□□ -0.73
TMEM260-208ENST00000555905 ZNF749O43361 778 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 PRMT3O60678 531 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 GALR3O60755 368 aaPredicted RBP10.46□□□□□ -0.73
TMEM260-208ENST00000555905 KLHL18O94889 574 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 DKK1O94907 266 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 B3GALT4O96024 378 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 FAM58BPP0C7Q3 252 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 IL1RNP18510 177 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 PRPS1L1P21108 318 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 SDHBP21912 280 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 GPX3P22352 226 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 JAK1P23458 1154 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 TACR1P25103 407 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 RPL3P39023 403 aaKnown RBP10.46□□□□□ -0.73
TMEM260-208ENST00000555905 AVPR1BP47901 424 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 NOVA1P51513 510 aaKnown RBP10.46□□□□□ -0.73
TMEM260-208ENST00000555905 CLDN8P56748 225 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 TAS2R50P59544 299 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 UFM1P61960 85 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 MC2RQ01718 297 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 SLAMF1Q13291 335 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 MAPRE2Q15555 327 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 AGKQ53H12 422 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 FAM91A1Q658Y4 838 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 PAOXQ6QHF9 649 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 ZNF793Q6ZN11 406 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 PPP1R3BQ86XI6 285 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 TMEM126BQ8IUX1 230 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 ARHGEF39Q8N4T4 335 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 GLB1L3Q8NCI6 653 aaPredicted RBP10.46□□□□□ -0.73
TMEM260-208ENST00000555905 OR9A4Q8NGU2 314 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 MVB12AQ96EY5 273 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 LIN37Q96GY3 246 aaPredicted RBP10.46□□□□□ -0.73
TMEM260-208ENST00000555905 C10orf90Q96M02 699 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 PRPF18Q99633 342 aaKnown RBP10.46□□□□□ -0.73
TMEM260-208ENST00000555905 CCDC106Q9BWC9 280 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 FAIM2Q9BWQ8 316 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 NPLQ9BXD5 320 aaPredicted RBP10.46□□□□□ -0.73
TMEM260-208ENST00000555905 CLK4Q9HAZ1 481 aaKnown RBP10.46□□□□□ -0.73
TMEM260-208ENST00000555905 LYRM4Q9HD34 91 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 FBXO8Q9NRD0 319 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 CCDC167Q9P0B6 97 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 NDOR1Q9UHB4 597 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 PHF11Q9UIL8 331 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 CDC14AQ9UNH5 594 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 LOXL2Q9Y4K0 774 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 SPACA6W5XKT8 324 aa10.46□□□□□ -0.73
TMEM260-208ENST00000555905 FAM186AA6NE01 2351 aa10.46□□□□□ -0.74
TMEM260-208ENST00000555905 CCDC187A0A096LP49 1063 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 A0A0A6YYC8 382 aaPredicted RBP10.45□□□□□ -0.74
TMEM260-208ENST00000555905 FAM234BA2RU67 622 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 CAPN14A8MX76 684 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 B4E171 279 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 I3L1I5 382 aaPredicted RBP10.45□□□□□ -0.74
TMEM260-208ENST00000555905 SGK494L7N484 410 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 DSCR3O14972 297 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 ANKRD28O15084 1053 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 AKAP10O43572 662 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 TMPRSS11DO60235 418 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 SCRG1O75711 98 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 LRATO95237 230 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 NSA2O95478 260 aaKnown RBP10.45□□□□□ -0.74
TMEM260-208ENST00000555905 IL3P08700 152 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 HBQ1P09105 142 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 FGF5P12034 268 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 DDX5P17844 614 aaKnown RBP10.45□□□□□ -0.74
TMEM260-208ENST00000555905 ALAS2P22557 587 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 PIK3R1P27986 724 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 TLX1P31314 330 aaPredicted RBP10.45□□□□□ -0.74
TMEM260-208ENST00000555905 TSPAN7P41732 249 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 POLR2JP52435 117 aaKnown RBP10.45□□□□□ -0.74
TMEM260-208ENST00000555905 KCNK10P57789 538 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 RAB15P59190 212 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 KLC1Q07866 573 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 C2orf80Q0P641 193 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 EIF3IQ13347 325 aaKnown RBP10.45□□□□□ -0.74
TMEM260-208ENST00000555905 KRT72Q14CN4 511 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 HEPACAMQ14CZ8 416 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 MRM1Q6IN84 353 aaKnown RBP10.45□□□□□ -0.74
TMEM260-208ENST00000555905 TTLL10Q6ZVT0 673 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 RAB11FIP2Q7L804 512 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 PRSS41Q7RTY9 318 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 R3HCC1LQ7Z5L2 792 aaKnown RBP10.45□□□□□ -0.74
TMEM260-208ENST00000555905 GPR180Q86V85 440 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 PDSS2Q86YH6 399 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 KRTCAP2Q8N6L1 136 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 BMPERQ8N8U9 685 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 AMER3Q8N944 861 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 PROKR1Q8TCW9 393 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 GFM2Q969S9 779 aaKnown RBP10.45□□□□□ -0.74
TMEM260-208ENST00000555905 TM4SF18Q96CE8 201 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 CMTM5Q96DZ9 223 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 EGLN2Q96KS0 407 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 TUBB6Q9BUF5 446 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 ACTR5Q9H9F9 607 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms