RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	SMAP2	Q8WU79	429 aa	Predicted RBP	3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	UBTD2	Q8WUN7	234 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	AZIN2	Q96A70	460 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	TBC1D31	Q96DN5	1066 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	OMA1	Q96E52	524 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	C2orf48	Q96LS8	159 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	FAM111A	Q96PZ2	611 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	PCDHB18P	Q96TA0	734 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	ZNF577	Q9BSK1	485 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	NUSAP1	Q9BXS6	441 aa	Known RBP	3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	KRTAP4-3	Q9BYR4	195 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	KRT23	Q9C075	422 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	MARCH7	Q9H992	704 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	GPN1	Q9HCN4	374 aa	Predicted RBP	3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	SDF2L1	Q9HCN8	221 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	DNPEP	Q9ULA0	475 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	ICAM5	Q9UMF0	924 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	WDR37	Q9Y2I8	494 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	DISP3	Q9P2K9	1392 aa		3.81	□□□□□ -1.8
KTN1-222	ENST00000555506	ATP6AP2	A0A1C7CYW4	349 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506		A0A1W2PR80	420 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	CPNE6	O95741	557 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	EPO	P01588	193 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	PTMA	P06454	111 aa	Known RBP	3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	PATE4	P0C8F1	98 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	CEACAM1	P13688	526 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	GNB3	P16520	340 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	CEBPB	P17676	345 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	CCNA2	P20248	432 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	ACP1	P24666	158 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	CHRNB4	P30926	498 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	NSF	P46459	744 aa	Known RBP	3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	RABIF	P47224	123 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	XG	P55808	180 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	KRT31	Q15323	416 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	TAB1	Q15750	504 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	FAM106A	Q4KMX7	169 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	LYPLAL1	Q5VWZ2	237 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	TMEM64	Q6YI46	380 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	RFPL4B	Q6ZWI9	263 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	PTAR1	Q7Z6K3	402 aa	Predicted RBP	3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	NR2C2AP	Q86WQ0	139 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	ERC1	Q8IUD2	1116 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	ELMOD2	Q8IZ81	293 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	ELMOD1	Q8N336	334 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	SLC43A2	Q8N370	569 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	DCLK2	Q8N568	766 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	ANKRD20A12P	Q8NF67	263 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	OR5T2	Q8NGG2	359 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	OR4D10	Q8NGI6	311 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	TMEM190	Q8WZ59	177 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	NSMCE2	Q96MF7	247 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	SSX3	Q99909	188 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	ABCG4	Q9H172	646 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	TRPV6	Q9H1D0	765 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	VPS33B	Q9H267	617 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	ZNF665	Q9H7R5	613 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	DCLRE1B	Q9H816	532 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	INTS10	Q9NVR2	710 aa	Known RBP	3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	PLEK2	Q9NYT0	353 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	MTF2	Q9Y483	593 aa	Predicted RBP	3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	NEDD4	P46934	1319 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	UMODL1	Q5DID0	1318 aa		3.8	□□□□□ -1.8
KTN1-222	ENST00000555506	hCG_38984	A0A1B0GV85	526 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	CFAP73	A6NFT4	308 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	ARHGAP42	A6NI28	874 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	ERVV-2	B6SEH9	535 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	ZNF195	O14628	629 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	P2RX6	O15547	441 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	PGK2	P07205	417 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	SFTPB	P07988	381 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	ETS1	P14921	441 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	STIP1	P31948	543 aa	Known RBP	3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	PITPNB	P48739	271 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	CCR4	P51679	360 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	PAX9	P55771	341 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	IRX4	P78413	519 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	CCZ1B	P86790	482 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	CCZ1	P86791	482 aa	Predicted RBP	3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	HNRNPD	Q14103	355 aa	Known RBP	3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	CCDC40	Q4G0X9	1142 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	CATSPER4	Q7RTX7	472 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	NLRP14	Q86W24	1093 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	HOGA1	Q86XE5	327 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	KDM8	Q8N371	416 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	OR6S1	Q8NH40	331 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	MAPK15	Q8TD08	544 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	SMPDL3A	Q92484	453 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	FAM218A	Q96MZ4	157 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	PGLYRP2	Q96PD5	576 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	S1PR3	Q99500	378 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	DPEP3	Q9H4B8	488 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	ACOXL	Q9NUZ1	547 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	ACTR3B	Q9P1U1	418 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	ZNF319	Q9P2F9	582 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	SPAST	Q9UBP0	616 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	MRPS2	Q9Y399	296 aa	Known RBP	3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	RNF123	Q5XPI4	1314 aa		3.79	□□□□□ -1.8
KTN1-222	ENST00000555506	SRRM4	A7MD48	611 aa	Known RBP	3.79	□□□□□ -1.8

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