RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 FAM198BQ6UWH4 519 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 Q6ZSR9 355 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 COMMD6Q7Z4G1 85 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 WDR75Q8IWA0 830 aaKnown RBP13.51□□□□□ -0.25
CHD8-208ENST00000555301 CA13Q8N1Q1 262 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 C1orf52Q8N6N3 182 aaKnown RBP13.51□□□□□ -0.25
CHD8-208ENST00000555301 OR5T3Q8NGG3 340 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 OR51Q1Q8NH59 317 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 PPP3R2Q96LZ3 170 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 OR1F2PQ96R84 312 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 SORBS1Q9BX66 1292 aaKnown RBP13.51□□□□□ -0.25
CHD8-208ENST00000555301 TGIF2Q9GZN2 237 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 WDR54Q9H977 334 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 GPN2Q9H9Y4 310 aaPredicted RBP13.51□□□□□ -0.25
CHD8-208ENST00000555301 LRTM1Q9HBL6 345 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 LYRM4Q9HD34 91 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 SLCO1B3Q9NPD5 702 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 C1orf109Q9NX04 203 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 LYARQ9NX58 379 aaKnown RBP13.51□□□□□ -0.25
CHD8-208ENST00000555301 SIRT5Q9NXA8 310 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 MS4A12Q9NXJ0 267 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 MARCOQ9UEW3 520 aaPredicted RBP13.51□□□□□ -0.25
CHD8-208ENST00000555301 DAPP1Q9UN19 280 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 FARSAQ9Y285 508 aaKnown RBP13.51□□□□□ -0.25
CHD8-208ENST00000555301 PCDHGA6Q9Y5G7 932 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 PTGDR2Q9Y5Y4 395 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 SPACA6W5XKT8 324 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 HEATR5BQ9P2D3 2071 aa13.51□□□□□ -0.25
CHD8-208ENST00000555301 A0A0A6YYD5 115 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 LOC101059948A0A1B0GTJ6 334 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 C1QTNF9BB2RNN3 333 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 TCP11X1B4DZS4 312 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 PSMD12O00232 456 aaPredicted RBP13.5□□□□□ -0.25
CHD8-208ENST00000555301 LSM1O15116 133 aaKnown RBP13.5□□□□□ -0.25
CHD8-208ENST00000555301 RRP8O43159 456 aaKnown RBP13.5□□□□□ -0.25
CHD8-208ENST00000555301 CHST10O43529 356 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 VPS4BO75351 444 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 SEC22BO75396 215 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 MYO1DO94832 1006 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 KLK1P06870 262 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 C1QTNF9P0C862 333 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 KITP10721 976 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 RNH1P13489 461 aaKnown RBP13.5□□□□□ -0.25
CHD8-208ENST00000555301 JAK1P23458 1154 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 XCR1P46094 333 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 LIM2P55344 173 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 OLR1P78380 273 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 BTKQ06187 659 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 SLAMF1Q13291 335 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 RUNX2Q13950 521 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 NKG7Q16617 165 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 SYT16Q17RD7 645 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 ATP6AP1LQ52LC2 224 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 CCNYL2Q5T2Q4 361 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 GALNT18Q6P9A2 607 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 FAM47EQ6ZV65 393 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 ENDOVQ8N8Q3 282 aaKnown RBP13.5□□□□□ -0.25
CHD8-208ENST00000555301 OR2T11Q8NH01 316 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 STT3BQ8TCJ2 826 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 TBC1D20Q96BZ9 403 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 MIEF2Q96C03 454 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 APIPQ96GX9 242 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 NUF2Q9BZD4 464 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 WDR70Q9NW82 654 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 CTSFQ9UBX1 484 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 PHF11Q9UIL8 331 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 MCM8Q9UJA3 840 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 TMED5Q9Y3A6 229 aa13.5□□□□□ -0.25
CHD8-208ENST00000555301 KIF26BQ2KJY2 2108 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 VSTM2BA6NLU5 285 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 TERTO14746 1132 aaKnown RBP13.49□□□□□ -0.25
CHD8-208ENST00000555301 KLK10O43240 276 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 PCDH7O60245 1069 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 EDF1O60869 148 aaKnown RBP13.49□□□□□ -0.25
CHD8-208ENST00000555301 GUCY1B2O75343 617 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 EEDO75530 441 aaKnown RBP13.49□□□□□ -0.25
CHD8-208ENST00000555301 BMP10O95393 424 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 ZGLP1P0C6A0 271 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 FAM58BPP0C7Q3 252 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 PTPN4P29074 926 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 TPP2P29144 1249 aaPredicted RBP13.49□□□□□ -0.25
CHD8-208ENST00000555301 TIA1P31483 386 aaKnown RBP eCLIP13.49□□□□□ -0.25
CHD8-208ENST00000555301 EIF2S3P41091 472 aaKnown RBP13.49□□□□□ -0.25
CHD8-208ENST00000555301 GSTM5P46439 218 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 MAPK12P53778 367 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 RAB38P57729 211 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 TRA2BP62995 288 aaKnown RBP13.49□□□□□ -0.25
CHD8-208ENST00000555301 VWA2Q5GFL6 755 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 MRM1Q6IN84 353 aaKnown RBP13.49□□□□□ -0.25
CHD8-208ENST00000555301 MED25Q71SY5 747 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 GPR180Q86V85 440 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 LRRC34Q8IZ02 419 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 TUBGCP3Q96CW5 907 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 C11orf24Q96F05 449 aaPredicted RBP13.49□□□□□ -0.25
CHD8-208ENST00000555301 PEX11GQ96HA9 241 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 NAF1Q96HR8 494 aaKnown RBP13.49□□□□□ -0.25
CHD8-208ENST00000555301 C3orf30Q96M34 536 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 MEAF6Q9HAF1 191 aa13.49□□□□□ -0.25
CHD8-208ENST00000555301 FAM53CQ9NYF3 392 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms