RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 DNM1LO00429 736 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 EEF1E1O43324 174 aaKnown RBP6.66□□□□□ -1.34
SYNE2-216ENST00000555002 AGR2O95994 175 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 TNFSF4P23510 183 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 NSG1P42857 185 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 HSD11B2P80365 405 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 TLE3Q04726 772 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 SPIN4Q56A73 249 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 SLC13A3Q8WWT9 602 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 KLHDC7BQ96G42 594 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 MAPKAP1Q9BPZ7 522 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 SUCNR1Q9BXA5 334 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 SLC1A7O00341 560 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 YY2O15391 372 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF254O75437 659 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 C2P06681 752 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 RPL11P62913 178 aaKnown RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 HNRNPA0Q13151 305 aaKnown RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 FAM205BPQ63HN1 556 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 C17orf50Q8WW18 174 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 HSH2DQ96JZ2 352 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 ACTR6Q9GZN1 396 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 RLIMQ9NVW2 624 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 VPS29Q9UBQ0 182 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 CLEC4EQ9ULY5 219 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 SOCS2O14508 198 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 GMDSO60547 372 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 NIPSNAP2O75323 286 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 PEPDP12955 493 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 JUPP14923 745 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 AK4P27144 223 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 SLC6A6P31641 620 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 GABRA3P34903 492 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 CAMLGP49069 296 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 HMGCS1Q01581 520 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 DYRK1AQ13627 763 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 RAB31Q13636 194 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 DHCR24Q15392 516 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 CHRNA6Q15825 494 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 PTF1AQ7RTS3 328 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 GRPEL2Q8TAA5 225 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 UGT1A4P22310 534 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 TAS2R39P59534 338 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 RNF4P78317 190 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 HABP2Q14520 560 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 FIGNQ5HY92 759 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 NCEH1Q6PIU2 408 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 CRTC1Q6UUV9 634 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 TM9SF4Q92544 642 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 DUSP9Q99956 384 aaKnown RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 ACTL8Q9H568 366 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF395Q9H8N7 513 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 OXSMQ9NWU1 459 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 SCN3AQ9NY46 2000 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 FAM237AA0A1B0GTK4 181 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 DUXAA6NLW8 204 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF705FA8MVS1 300 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 LRRN3E7EW58 273 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 TLX2O43763 284 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 ENSAO43768 121 aaKnown RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 ECI2O75521 394 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 ZIC2O95409 532 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF705DP0CH99 300 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF705BP0CI00 300 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-216ENST00000555002 PRPS2P11908 318 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 NDUFV2P19404 249 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 NPBWR1P48145 328 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 AQP4P55087 323 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 OR4D2P58180 307 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 FXYD4P59646 89 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 RAB8AP61006 207 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 SAMD12Q8N8I0 201 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 RAD9AQ99638 391 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 LRRN3Q9H3W5 708 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 EMC3Q9P0I2 261 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 E9PI62 339 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 MATN2O00339 956 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 P04436 131 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 CHRNA4P43681 627 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 LRIT3Q3SXY7 679 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 FAM69BQ5VUD6 431 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 PGAM4Q8N0Y7 254 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 CNEP1R1Q8N9A8 125 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 GAB3Q8WWW8 586 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 GLYATL1Q969I3 302 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 CPXM1Q96SM3 734 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 TSSK6Q9BXA6 273 aa6.65□□□□□ -1.34
SYNE2-216ENST00000555002 B4GAT1O43505 415 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 TSPAN6O43657 245 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 ADH1BP00325 375 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 BMP8BP34820 402 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF81P51508 661 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 EEF1A1P68104 462 aaKnown RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 ARL13AQ5H913 290 aaPredicted RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 AKR1C8PQ5T2L2 129 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 EEF1A1P5Q5VTE0 462 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 UNQ6126/PRO20091Q6UXV3 157 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 FAM83HQ6ZRV2 1179 aaPredicted RBP6.65□□□□□ -1.35
SYNE2-216ENST00000555002 BMP8AQ7Z5Y6 402 aa6.65□□□□□ -1.35
SYNE2-216ENST00000555002 LENG8Q96PV6 779 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms