RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 DPEP2Q9H4A9 486 aa4.46□□□□□ -1.7
CHD8-207ENST00000554384 RPF1Q9H9Y2 349 aaKnown RBP4.46□□□□□ -1.7
CHD8-207ENST00000554384 ATAD3AQ9NVI7 634 aa4.46□□□□□ -1.7
CHD8-207ENST00000554384 IL36AQ9UHA7 158 aa4.46□□□□□ -1.7
CHD8-207ENST00000554384 SLC12A6Q9UHW9 1150 aa4.46□□□□□ -1.7
CHD8-207ENST00000554384 STX8Q9UNK0 236 aa4.46□□□□□ -1.7
CHD8-207ENST00000554384 PPP1R3CQ9UQK1 317 aa4.46□□□□□ -1.7
CHD8-207ENST00000554384 SNX5Q9Y5X3 404 aa4.46□□□□□ -1.7
CHD8-207ENST00000554384 GOLGB1Q14789 3259 aaKnown RBP4.46□□□□□ -1.7
CHD8-207ENST00000554384 CHD4Q14839 1912 aa4.46□□□□□ -1.7
CHD8-207ENST00000554384 COL22A1Q8NFW1 1626 aaPredicted RBP4.46□□□□□ -1.7
CHD8-207ENST00000554384 CCDC141Q6ZP82 1450 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 PIK3R4Q99570 1358 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 A0A087X0K7 114 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 MEIOCA2RUB1 952 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 TRIM64A6NGJ6 449 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 TRIM64BA6NI03 449 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 ZNF732B4DXR9 585 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 NR5A2O00482 541 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 MAGEB2O15479 319 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 ECE2O60344 883 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 CYTIPO60759 359 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 ZG16O60844 167 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 VTNP04004 478 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 ATP6V1B1P15313 513 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 VCLP18206 1134 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 GJB2P29033 226 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 HNF4AP41235 474 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 SMSP52788 366 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 LRRC37A5PQ49AS3 106 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 C17orf107Q6ZR85 190 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 FAM89BQ8N5H3 189 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 MGARPQ8TDB4 240 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 C17orf62Q9BQA9 187 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 NYXQ9GZU5 481 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 WDR13Q9H1Z4 485 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 FGF22Q9HCT0 170 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 POLKQ9UBT6 870 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 FBXL4Q9UKA2 621 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 ELF5Q9UKW6 265 aaPredicted RBP4.45□□□□□ -1.7
CHD8-207ENST00000554384 CEP152O94986 1710 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 NUP188Q5SRE5 1749 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.45□□□□□ -1.7
CHD8-207ENST00000554384 ARHGAP31Q2M1Z3 1444 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 PFASO15067 1338 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 CNTNAP2Q9UHC6 1331 aa4.45□□□□□ -1.7
CHD8-207ENST00000554384 RPRD2Q5VT52 1461 aaKnown RBP4.44□□□□□ -1.7
CHD8-207ENST00000554384 LRRIQ1Q96JM4 1722 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 MYH14Q7Z406 1995 aaKnown RBP4.44□□□□□ -1.7
CHD8-207ENST00000554384 TMEM131LA2VDJ0 1609 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 A0A087WZ39 114 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 LINC01565O15544 149 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 LRCH4O75427 683 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 PRKAR1AP10644 381 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 VDRP11473 427 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 AP1B1Q10567 949 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 HFEQ30201 348 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 TMEM30BQ3MIR4 351 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 AARDQ4LEZ3 155 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 ARMCX4Q5H9R4 360 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 SIAH3Q8IW03 269 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 SPC24Q8NBT2 197 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 CLEC1AQ8NC01 280 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 OR2T6Q8NHC8 308 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 CD99L2Q8TCZ2 262 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 PDLIM5Q96HC4 596 aaKnown RBP4.44□□□□□ -1.7
CHD8-207ENST00000554384 CLEC7AQ9BXN2 247 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 RNPEPL1Q9HAU8 725 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 SPG21Q9NZD8 308 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 PLCL2Q9UPR0 1127 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 EHBP1L1Q8N3D4 1523 aa4.44□□□□□ -1.7
CHD8-207ENST00000554384 PXDNQ92626 1479 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 METP08581 1390 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 RREB1Q92766 1687 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 C13orf42A0A1B0GVH6 325 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 MAGEB16A2A368 324 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 CCDC162PA2VCL2 907 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 C15orf61A6NNL5 157 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 RAD51DO75771 328 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 SLC6A12P48065 614 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 KHKP50053 298 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 KIAA1024LP59773 190 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 SGCGQ13326 291 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 EFTUD2Q15029 972 aaKnown RBP eCLIP4.43□□□□□ -1.7
CHD8-207ENST00000554384 IFI44LQ53G44 452 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 LRRC38Q5VT99 294 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 TRMT11Q7Z4G4 463 aaKnown RBP4.43□□□□□ -1.7
CHD8-207ENST00000554384 CATSPERDQ86XM0 798 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 OR6S1Q8NH40 331 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 MRGPRDQ8TDS7 321 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 BCL2L2Q92843 193 aaPredicted RBP4.43□□□□□ -1.7
CHD8-207ENST00000554384 NACAP1Q9BZK3 213 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 MTIF3Q9H2K0 278 aaKnown RBP4.43□□□□□ -1.7
CHD8-207ENST00000554384 GPR173Q9NS66 373 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 PNPLA3Q9NST1 481 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 FAM212BQ9NTI7 297 aaPredicted RBP4.43□□□□□ -1.7
CHD8-207ENST00000554384 DNAJC11Q9NVH1 559 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 C2orf42Q9NWW7 574 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 TRPC4Q9UBN4 977 aa4.43□□□□□ -1.7
CHD8-207ENST00000554384 PSORS1C1Q9UIG5 152 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms