RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 KRT12Q99456 494 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 MCMBPQ9BTE3 642 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 EHD1Q9H4M9 534 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 PRTFDC1Q9NRG1 225 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 DNAJC11Q9NVH1 559 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 WWOXQ9NZC7 414 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 MTO1Q9Y2Z2 717 aaKnown RBP17.52■□□□□ 0.4
CPSF2-203ENST00000554290 A0A0G2JN53 185 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 CCDC166P0CW27 439 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 ELAVL4P26378 380 aaKnown RBP17.51■□□□□ 0.39
CPSF2-203ENST00000554290 GGT5P36269 586 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 PLA2G16P53816 162 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 RAB38P57729 211 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 CALCOCO2Q13137 446 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 RCN2Q14257 317 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 RNFT1Q5M7Z0 435 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 SULT1C3Q6IMI6 304 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 TRIM40Q6P9F5 258 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 GPSM1Q86YR5 675 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 ZNF595Q8IYB9 648 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 CYP4Z2PQ8N1L4 340 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 AGAP11Q8TF27 550 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 REXO4Q9GZR2 422 aaKnown RBP17.51■□□□□ 0.39
CPSF2-203ENST00000554290 COPS7BQ9H9Q2 264 aaPredicted RBP17.51■□□□□ 0.39
CPSF2-203ENST00000554290 PPIEQ9UNP9 301 aaKnown RBP17.51■□□□□ 0.39
CPSF2-203ENST00000554290 ABCA12Q86UK0 2595 aa17.51■□□□□ 0.39
CPSF2-203ENST00000554290 E9PLN8 166 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 TFECO14948 347 aaPredicted RBP17.5■□□□□ 0.39
CPSF2-203ENST00000554290 ITGA10O75578 1167 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 CLDN14O95500 239 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 SNRPB2P08579 225 aaKnown RBP17.5■□□□□ 0.39
CPSF2-203ENST00000554290 STMN1P16949 149 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 MEOX1P50221 254 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 ATP6V0D1P61421 351 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 TGM3Q08188 693 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 ADPRMQ3LIE5 342 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 DOLPP1Q86YN1 238 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 SPATA6LQ8N4H0 392 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 SNX31Q8N9S9 440 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 MTFMTQ96DP5 389 aaKnown RBP17.5■□□□□ 0.39
CPSF2-203ENST00000554290 PTCD3Q96EY7 689 aaKnown RBP17.5■□□□□ 0.39
CPSF2-203ENST00000554290 QRFPRQ96P65 431 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 SERINC2Q96SA4 455 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 VKORC1Q9BQB6 163 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 CAB39LQ9H9S4 337 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 ADAP2Q9NPF8 381 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 SMYD2Q9NRG4 433 aa17.5■□□□□ 0.39
CPSF2-203ENST00000554290 YARS2Q9Y2Z4 477 aaKnown RBP17.5■□□□□ 0.39
CPSF2-203ENST00000554290 EIF3HO15372 352 aaKnown RBP eCLIP17.49■□□□□ 0.39
CPSF2-203ENST00000554290 TAPBPO15533 448 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 PEX1O43933 1283 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 STK16O75716 305 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 PIAS1O75925 651 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 ZFAND5O76080 213 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 S100BP04271 92 aaPredicted RBP17.49■□□□□ 0.39
CPSF2-203ENST00000554290 TFEBP19484 476 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 SSTR1P30872 391 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 SSR4P51571 173 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 MTTPP55157 894 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 HSF1Q00613 529 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 EFTUD2Q15029 972 aaKnown RBP eCLIP17.49■□□□□ 0.39
CPSF2-203ENST00000554290 PDK4Q16654 411 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 HIST2H2ACQ16777 129 aaPredicted RBP17.49■□□□□ 0.39
CPSF2-203ENST00000554290 XKR6Q5GH73 641 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 HIST2H2AA3Q6FI13 130 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 CYS1Q717R9 158 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 SULF2Q8IWU5 870 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 TMEM132CQ8N3T6 1108 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 FAM47BQ8NA70 645 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 PHF10Q8WUB8 498 aaKnown RBP17.49■□□□□ 0.39
CPSF2-203ENST00000554290 NCLNQ969V3 563 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 PHF12Q96QT6 1004 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 CPNE1Q99829 537 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 TMEM79Q9BSE2 394 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 EFCAB11Q9BUY7 163 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 SAYSD1Q9NPB0 183 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 TIMMDC1Q9NPL8 285 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 CD274Q9NZQ7 290 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 ASB1Q9Y576 335 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 CLCA3PQ9Y6N3 262 aa17.49■□□□□ 0.39
CPSF2-203ENST00000554290 FAM187AA6NFU0 413 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 PHGDHO43175 533 aaKnown RBP17.48■□□□□ 0.39
CPSF2-203ENST00000554290 WISP3O95389 354 aaPredicted RBP17.48■□□□□ 0.39
CPSF2-203ENST00000554290 IFNA16P05015 189 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 HSPA7P48741 367 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 LAPTM5Q13571 262 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 BMPR2Q13873 1038 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 DOC2AQ14183 400 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 ELAVL1Q15717 326 aaKnown RBP17.48■□□□□ 0.39
CPSF2-203ENST00000554290 PAGE2BQ5JRK9 111 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 ABHD17CQ6PCB6 329 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 MAATS1Q7Z4T9 603 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 CHERPQ8IWX8 916 aaKnown RBP17.48■□□□□ 0.39
CPSF2-203ENST00000554290 TMEM52Q8NDY8 209 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 KIAA1191Q96A73 305 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 WDR34Q96EX3 536 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 GPR22Q99680 433 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 RBBP8Q99708 897 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 ERP44Q9BS26 406 aa17.48■□□□□ 0.39
CPSF2-203ENST00000554290 ROGDIQ9GZN7 287 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms