RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ARF3P61204 181 aaPredicted RBP10.34□□□□□ -0.75
PABPN1-203ENST00000553960 SRSF5Q13243 272 aaKnown RBP10.34□□□□□ -0.75
PABPN1-203ENST00000553960 TRA2AQ13595 282 aaKnown RBP eCLIP10.34□□□□□ -0.75
PABPN1-203ENST00000553960 CEACAM7Q14002 265 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 TIGD2Q4W5G0 525 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 MTX3Q5HYI7 312 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 C6orf163Q5TEZ5 329 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 FAM219BQ5XKK7 198 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 TMEM71Q6P5X7 295 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 CYB5D1Q6P9G0 228 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 ZNF793Q6ZN11 406 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 ARHGAP22Q7Z5H3 698 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 DHDDSQ86SQ9 333 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 CALHM3Q86XJ0 350 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 TMEM126BQ8IUX1 230 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 SFTPA2Q8IWL1 248 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 RNF175Q8N4F7 328 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 KIF2BQ8N4N8 673 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 ENDOVQ8N8Q3 282 aaKnown RBP10.34□□□□□ -0.75
PABPN1-203ENST00000553960 TNIP2Q8NFZ5 429 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 OR4D9Q8NGE8 314 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 RERGQ96A58 199 aaPredicted RBP10.34□□□□□ -0.75
PABPN1-203ENST00000553960 VPS33AQ96AX1 596 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 CDRT15Q96T59 188 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 NPAS2Q99743 824 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 DPH2Q9BQC3 489 aaPredicted RBP10.34□□□□□ -0.75
PABPN1-203ENST00000553960 THTPAQ9BU02 230 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 DENND2DQ9H6A0 471 aaPredicted RBP10.34□□□□□ -0.75
PABPN1-203ENST00000553960 GAREM1Q9H706 876 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 DCLRE1BQ9H816 532 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 SYNPO2LQ9H987 977 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 IL21RQ9HBE5 538 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 ACTR3BQ9P1U1 418 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 G3BP2Q9UN86 482 aaKnown RBP10.34□□□□□ -0.75
PABPN1-203ENST00000553960 POMPQ9Y244 141 aa10.34□□□□□ -0.75
PABPN1-203ENST00000553960 GPR179Q6PRD1 2367 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 OTOGLQ3ZCN5 2332 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 TRBV23OR9-2A0A075B6M9 112 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 ARHGAP10A1A4S6 786 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 PRORSD1PA6NEY8 169 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 AQP12BA6NM10 295 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 H0YIG0 161 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 NTN3O00634 580 aaPredicted RBP10.33□□□□□ -0.76
PABPN1-203ENST00000553960 MAP3K7O43318 606 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 ERI3O43414 337 aaKnown RBP10.33□□□□□ -0.76
PABPN1-203ENST00000553960 TMPRSS11DO60235 418 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 GALR3O60755 368 aaPredicted RBP10.33□□□□□ -0.76
PABPN1-203ENST00000553960 FKBP6O75344 327 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 SOX30O94993 753 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 FAM58BPP0C7Q3 252 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 ST6GAL1P15907 406 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 NELFEP18615 380 aaKnown RBP10.33□□□□□ -0.76
PABPN1-203ENST00000553960 IL10P22301 178 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 MPLP40238 635 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 GZMMP51124 257 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 TAS2R50P59544 299 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 HSD11B2P80365 405 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 MXRA7P84157 204 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 NFYCQ13952 458 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 TRIM61Q5EBN2 209 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 LCN8Q6JVE9 175 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 ZFP1Q6P2D0 407 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 TMEM64Q6YI46 380 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 RIPOR1Q6ZS17 1223 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 ADCK2Q7Z695 626 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 SERPINA11Q86U17 422 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 MCATQ8IVS2 390 aaKnown RBP10.33□□□□□ -0.76
PABPN1-203ENST00000553960 AQP12AQ8IXF9 295 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 MSRB3Q8IXL7 192 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 OR5P2Q8WZ92 322 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 PPCDCQ96CD2 204 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 FCRL4Q96PJ5 515 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 ZNF768Q9H5H4 540 aaKnown RBP10.33□□□□□ -0.76
PABPN1-203ENST00000553960 KAT8Q9H7Z6 458 aaKnown RBP10.33□□□□□ -0.76
PABPN1-203ENST00000553960 PDE7BQ9NP56 450 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 CMTM6Q9NX76 183 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 SLC25A37Q9NYZ2 338 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 ZNF282Q9UDV7 671 aaPredicted RBP10.33□□□□□ -0.76
PABPN1-203ENST00000553960 PSME2Q9UL46 239 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 BTBD3Q9Y2F9 522 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 PCDHB3Q9Y5E6 796 aa10.33□□□□□ -0.76
PABPN1-203ENST00000553960 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.33□□□□□ -0.76
PABPN1-203ENST00000553960 MYO1GB0I1T2 1018 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 H0YHG0 523 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 TNFRSF10AO00220 468 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 NME4O00746 187 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 KHNYNO15037 678 aaKnown RBP10.32□□□□□ -0.76
PABPN1-203ENST00000553960 FLRT2O43155 660 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 SIGLEC6O43699 453 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 CIB2O75838 187 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 NSA2O95478 260 aaKnown RBP10.32□□□□□ -0.76
PABPN1-203ENST00000553960 CPNE6O95741 557 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 CAPNS1P04632 268 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 CYC1P08574 325 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 LAMP1P11279 417 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 COX7A2P14406 83 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 CDH3P22223 829 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 ACP1P24666 158 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 GALNSP34059 522 aa10.32□□□□□ -0.76
PABPN1-203ENST00000553960 GRK6P43250 576 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms