RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 CHD7Q9P2D1 2997 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 FFAR1O14842 300 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 SPINT1O43278 529 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 ATG13O75143 517 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 SEMA7AO75326 666 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 C1orf105O95561 183 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 DLGAP3O95886 979 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 LRG1P02750 347 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 RPLP0P05388 317 aaKnown RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 IL3P08700 152 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 CYP2A6P11509 494 aaPredicted RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 TYRP14679 529 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 NPPBP16860 134 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 WEE1P30291 646 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 FEN1P39748 380 aaKnown RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 MMP12P39900 470 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 NKX2-5P52952 324 aaPredicted RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 LIM2P55344 173 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 PCBP3P57721 371 aaKnown RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 CDK6Q00534 326 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 C2orf80Q0P641 193 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 CDC20Q12834 499 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 TMEM115Q12893 351 aaPredicted RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 PTGES3Q15185 160 aaKnown RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 KCNJ8Q15842 424 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 SSX1Q16384 188 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 TSTQ16762 297 aaKnown RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 DUSP7Q16829 419 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 TMEM53Q6P2H8 277 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 TMEM220Q6QAJ8 160 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 PARS2Q7L3T8 475 aaKnown RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 VN1R5Q7Z5H4 357 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 DDX53Q86TM3 631 aaKnown RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 HEATR4Q86WZ0 1026 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 CYP4Z2PQ8N1L4 340 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 POC5Q8NA72 575 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 AQP11Q8NBQ7 271 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 ATL1Q8WXF7 558 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 IL17FQ96PD4 163 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 RAD9AQ99638 391 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 WFDC6Q9BQY6 131 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZSCAN5AQ9BUG6 496 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 ABCG4Q9H172 646 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 CXorf36Q9H7Y0 433 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 SLAMF7Q9NQ25 335 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 C11orf16Q9NQ32 467 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 IMPAD1Q9NX62 359 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 RAB23Q9ULC3 237 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 PLAGL1Q9UM63 463 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 IFT52Q9Y366 437 aa6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 PCYT1BQ9Y5K3 369 aaPredicted RBP6.63□□□□□ -1.35
LINC-ROR-201ENST00000553704 COL4A3Q01955 1670 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 TRBV4-1A0A0J9YWV2 114 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 TRBC2A0A5B9 178 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 HTR3EA5X5Y0 456 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 GPR37L1O60883 481 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 SOX14O95416 240 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 GASTP01350 101 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 KLK1P06870 262 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 GSTT2P0CG29 244 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 GSTT2BP0CG30 244 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 ANXA8P13928 327 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 PCSK2P16519 638 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 CHMP24386 653 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 SERPINB1P30740 379 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 RCVRNP35243 200 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 CHI3L1P36222 383 aaPredicted RBP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 TUBA1BP68363 451 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 PCDH1Q08174 1060 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 PUM1Q14671 1186 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 MED22Q15528 200 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF284Q2VY69 593 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF362Q5T0B9 420 aaPredicted RBP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 ATAD3BQ5T9A4 648 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 DESI1Q6ICB0 168 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 FAM71E1Q6IPT2 247 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF770Q6IQ21 691 aaPredicted RBP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 TUBA1AQ71U36 451 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 CCDC80Q76M96 950 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 ATCAYQ86WG3 371 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 LSRQ86X29 649 aaPredicted RBP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 LACC1Q8IV20 430 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 LRRC56Q8IYG6 542 aaPredicted RBP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 C2orf73Q8N5S3 287 aaPredicted RBP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 CELF2-AS1Q8N7Q2 184 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 Q8N9G6 341 aaPredicted RBP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 PPCDCQ96CD2 204 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 AP2M1Q96CW1 435 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 COL21A1Q96P44 957 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 SDHCQ99643 169 aaPredicted RBP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 PIP5K1AQ99755 562 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 EHD1Q9H4M9 534 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 TMEM38AQ9H6F2 299 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 NMNAT1Q9HAN9 279 aaPredicted RBP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 ANKHQ9HCJ1 492 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 CCDC59Q9P031 241 aaKnown RBP6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 TAAR2Q9P1P5 351 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 WDR37Q9Y2I8 494 aa6.62□□□□□ -1.35
LINC-ROR-201ENST00000553704 KCNE2Q9Y6J6 123 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms