RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CCL3P10147 92 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 CTSSP25774 331 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 IMPA1P29218 277 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 OPRM1P35372 400 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 CYLC1P35663 651 aaPredicted RBP12.73□□□□□ -0.37
PRPF39-204ENST00000553605 PPP1R21Q6ZMI0 780 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 MPP5Q8N3R9 675 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 LIX1Q8N485 282 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 RBM24Q9BX46 236 aaKnown RBP12.73□□□□□ -0.37
PRPF39-204ENST00000553605 SLC6A15Q9H2J7 730 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 UBTD1Q9HAC8 227 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 CLK4Q9HAZ1 481 aaKnown RBP12.73□□□□□ -0.37
PRPF39-204ENST00000553605 ACKR4Q9NPB9 350 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 ADGRE2Q9UHX3 823 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 SH2B3Q9UQQ2 575 aa12.73□□□□□ -0.37
PRPF39-204ENST00000553605 KIAA1549Q9HCM3 1950 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 H3BMM5 538 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 ZBTB14O43829 449 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 AVILO75366 819 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 RFPL3SP0C7P2 107 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 ZNF888P0CJ79 500 aaPredicted RBP12.72□□□□□ -0.37
PRPF39-204ENST00000553605 RNH1P13489 461 aaKnown RBP12.72□□□□□ -0.37
PRPF39-204ENST00000553605 PIGAP37287 484 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 GRIA1P42261 906 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 SKIV2L2P42285 1042 aaKnown RBP12.72□□□□□ -0.37
PRPF39-204ENST00000553605 PTH2RP49190 550 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 ADARP55265 1226 aaKnown RBP12.72□□□□□ -0.37
PRPF39-204ENST00000553605 UBASH3AP57075 661 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 PWP1Q13610 501 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 ABHD13Q7L211 337 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 C17orf64Q86WR6 236 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 SREK1Q8WXA9 508 aaKnown RBP12.72□□□□□ -0.37
PRPF39-204ENST00000553605 ASB11Q8WXH4 323 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 WDR83Q9BRX9 315 aaKnown RBP12.72□□□□□ -0.37
PRPF39-204ENST00000553605 PCBD2Q9H0N5 130 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 ZNF703Q9H7S9 590 aaPredicted RBP12.72□□□□□ -0.37
PRPF39-204ENST00000553605 CHRAC1Q9NRG0 131 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 C6orf203Q9P0P8 240 aaPredicted RBP12.72□□□□□ -0.37
PRPF39-204ENST00000553605 NDRG3Q9UGV2 375 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 MMACHCQ9Y4U1 282 aa12.72□□□□□ -0.37
PRPF39-204ENST00000553605 ERI2A8K979 691 aaKnown RBP12.71□□□□□ -0.37
PRPF39-204ENST00000553605 TJP3O95049 919 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 IL18BPO95998 194 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 ESR1P03372 595 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 SERPIND1P05546 499 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 PPP2R1BP30154 601 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 TRPC1P48995 793 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 HK2P52789 917 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 HADHBP55084 474 aaKnown RBP12.71□□□□□ -0.37
PRPF39-204ENST00000553605 GDF10P55107 478 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 TBPL1P62380 186 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 BMPR2Q13873 1038 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 SF3B4Q15427 424 aaKnown RBP eCLIP12.71□□□□□ -0.37
PRPF39-204ENST00000553605 C10orf62Q5T681 223 aaPredicted RBP12.71□□□□□ -0.37
PRPF39-204ENST00000553605 RNF187Q5TA31 235 aaPredicted RBP12.71□□□□□ -0.37
PRPF39-204ENST00000553605 NSUN5P2Q63ZY6 315 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 OPN5Q6U736 354 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 HSDL2Q6YN16 418 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 OTUD6BQ8N6M0 293 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 PPHLN1Q8NEY8 458 aaKnown RBP12.71□□□□□ -0.37
PRPF39-204ENST00000553605 CCDC42Q96M95 316 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 TIMP4Q99727 224 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 GALNT8Q9NY28 637 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 INTUQ9ULD6 942 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 CRYL1Q9Y2S2 319 aa12.71□□□□□ -0.37
PRPF39-204ENST00000553605 ANK2Q01484 3957 aa12.71□□□□□ -0.38
PRPF39-204ENST00000553605 C15orf38-AP3S2A0A0A6YYH1 394 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 E5RI56 91 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 GFYI3L273 518 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 OR1F1O43749 312 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 ZNF354AO60765 605 aaPredicted RBP12.7□□□□□ -0.38
PRPF39-204ENST00000553605 ERN1O75460 977 aaKnown RBP12.7□□□□□ -0.38
PRPF39-204ENST00000553605 CDH1P12830 882 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 PTPN7P35236 360 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 RGS1Q08116 209 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 DUSP8Q13202 625 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 TNK1Q13470 666 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 CAPRIN1Q14444 709 aaKnown RBP12.7□□□□□ -0.38
PRPF39-204ENST00000553605 C20orf204Q6ZNR8 217 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 SDCCAG8Q86SQ7 713 aaPredicted RBP12.7□□□□□ -0.38
PRPF39-204ENST00000553605 LUZP2Q86TE4 346 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 PM20D2Q8IYS1 436 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 LRRC25Q8N386 305 aaPredicted RBP12.7□□□□□ -0.38
PRPF39-204ENST00000553605 RASGEF1CQ8N431 466 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 MAPK1IP1LQ8NDC0 245 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 OR8K1Q8NGG5 319 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 UTP15Q8TED0 518 aaKnown RBP12.7□□□□□ -0.38
PRPF39-204ENST00000553605 LPGAT1Q92604 370 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 TRIB1Q96RU8 372 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 CHP1Q99653 195 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 ZFP64Q9NPA5 681 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 ZNHIT6Q9NWK9 470 aaKnown RBP12.7□□□□□ -0.38
PRPF39-204ENST00000553605 QPCTLQ9NXS2 382 aa12.7□□□□□ -0.38
PRPF39-204ENST00000553605 BOKQ9UMX3 212 aaPredicted RBP12.7□□□□□ -0.38
PRPF39-204ENST00000553605 MBD3L3A6NE82 208 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-204ENST00000553605 CD8B2A6NJW9 211 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 SIAH2O43255 324 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 TLX2O43763 284 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-204ENST00000553605 TP53P04637 393 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-204ENST00000553605 CPA2P48052 419 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms